Emerging Strategies and Integrated Systems Microbiology Technologies for Biodiscovery of Marine Bioactive Compounds
出版年份 2014 全文链接
标题
Emerging Strategies and Integrated Systems Microbiology Technologies for Biodiscovery of Marine Bioactive Compounds
作者
关键词
-
出版物
Marine Drugs
Volume 12, Issue 6, Pages 3516-3559
出版商
MDPI AG
发表日期
2014-06-10
DOI
10.3390/md12063516
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Marine natural products
- (2014) John W. Blunt et al. NATURAL PRODUCT REPORTS
- Nitrilase Activity Screening on Structurally Diverse Substrates: Providing Biocatalytic Tools for Organic Synthesis
- (2013) Carine Vergne-Vaxelaire et al. ADVANCED SYNTHESIS & CATALYSIS
- Chemical dereplication of marine actinomycetes by liquid chromatography–high resolution mass spectrometry profiling and statistical analysis
- (2013) David Forner et al. ANALYTICA CHIMICA ACTA
- Multiplexing of Combinatorial Chemistry in Antimycin Biosynthesis: Expansion of Molecular Diversity and Utility
- (2013) Yan Yan et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- The regulation and biosynthesis of antimycins
- (2013) Ryan F Seipke et al. Beilstein Journal of Organic Chemistry
- Amylase enzyme fromBacillus subtilisS8-18: A potential desizing agent from the marine environment
- (2013) Balu Jancy Kalpana et al. BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY
- Cloning and characterization of a novel cold-active glycoside hydrolase family 1 enzyme with β-glucosidase, β-fucosidase and β-galactosidase activities
- (2013) Anna Wierzbicka-Woś et al. BMC BIOTECHNOLOGY
- Kinase Inhibitors of Marine Origin
- (2013) Sandip B. Bharate et al. CHEMICAL REVIEWS
- A Cryptic Polyene Biosynthetic Gene Cluster in Streptomyces calvus Is Expressed upon Complementation with a Functional bldA Gene
- (2013) Lindsay Kalan et al. CHEMISTRY & BIOLOGY
- Meta-omic characterization of prokaryotic gene clusters for natural product biosynthesis
- (2013) Michael M Schofield et al. CURRENT OPINION IN BIOTECHNOLOGY
- PCR screening reveals considerable unexploited biosynthetic potential of ansamycins and a mysterious family of AHBA-containing natural products in actinomycetes
- (2013) H.-X. Wang et al. JOURNAL OF APPLIED MICROBIOLOGY
- Microbial natural products: molecular blueprints for antitumor drugs
- (2013) Lesley-Ann Giddings et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Heterologous expression of natural product biosynthetic gene clusters in Streptomyces coelicolor: from genome mining to manipulation of biosynthetic pathways
- (2013) Juan Pablo Gomez-Escribano et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Identification of a marine NADPH-dependent aldehyde reductase for chemoselective reduction of aldehydes
- (2013) Guangyue Li et al. JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC
- Identification of Elaiophylin Derivatives from the Marine-Derived Actinomycete Streptomyces sp. 7-145 Using PCR-Based Screening
- (2013) Chunyan Wu et al. JOURNAL OF NATURAL PRODUCTS
- Molecular Networking as a Dereplication Strategy
- (2013) Jane Y. Yang et al. JOURNAL OF NATURAL PRODUCTS
- Proteogenomic Definition of Biomarkers for the Large Roseobacter Clade and Application for a Quick Screening of New Environmental Isolates
- (2013) Joseph Alexander Christie-Oleza et al. JOURNAL OF PROTEOME RESEARCH
- Proteomics Guided Discovery of Flavopeptins: Anti-proliferative Aldehydes Synthesized by a Reductase Domain-Containing Non-ribosomal Peptide Synthetase
- (2013) Yunqiu Chen et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Characterisation of an l-Haloacid Dehalogenase from the Marine Psychrophile Psychromonas ingrahamii with Potential Industrial Application
- (2013) Halina R. Novak et al. MARINE BIOTECHNOLOGY
- Integrated Metagenomic and Metatranscriptomic Analyses of Microbial Communities in the Meso- and Bathypelagic Realm of North Pacific Ocean
- (2013) Jieying Wu et al. Marine Drugs
- Diversity of Secondary Metabolites from Marine Bacillus Species: Chemistry and Biological Activity
- (2013) Muhammad Mondol et al. Marine Drugs
- Subtilomycin: A New Lantibiotic from Bacillus subtilis Strain MMA7 Isolated from the Marine Sponge Haliclona simulans
- (2013) Robert Phelan et al. Marine Drugs
- Biocatalytic retrosynthesis
- (2013) Nicholas J Turner et al. Nature Chemical Biology
- Sustainable production of biologically active molecules of marine based origin
- (2013) Patrick M. Murray et al. New Biotechnology
- IMG 4 version of the integrated microbial genomes comparative analysis system
- (2013) Victor M. Markowitz et al. NUCLEIC ACIDS RESEARCH
- antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers
- (2013) Kai Blin et al. NUCLEIC ACIDS RESEARCH
- BAGEL3: automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides
- (2013) Auke J. van Heel et al. NUCLEIC ACIDS RESEARCH
- Proteogenomic Analysis of a Thermophilic Bacterial Consortium Adapted to Deconstruct Switchgrass
- (2013) Patrik D'haeseleer et al. PLoS One
- Marine Sediment-Derived Streptomyces Bacteria from British Columbia, Canada Are a Promising Microbiota Resource for the Discovery of Antimicrobial Natural Products
- (2013) Doralyn S. Dalisay et al. PLoS One
- Antimicrobial Activity of Heterotrophic Bacterial Communities from the Marine Sponge Erylus discophorus (Astrophorida, Geodiidae)
- (2013) Ana Patrícia Graça et al. PLoS One
- Evidence of Unique and Generalist Microbes in Distantly Related Sympatric Intertidal Marine Sponges (Porifera: Demospongiae)
- (2013) Anoop Alex et al. PLoS One
- Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules
- (2013) R. D. Kersten et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bioactive polyhydroxylated sterols from the marine sponge Haliclona crassiloba
- (2013) Zhong-Bin Cheng et al. STEROIDS
- Purification and characterization of a dehalogenase from Pseudomonas stutzeri DEH130 isolated from the marine sponge Hymeniacidon perlevis
- (2013) Jinyou Zhang et al. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
- Detergent compatible alkaline lipase produced by marine Bacillus smithii BTMS 11
- (2013) V. P. Lailaja et al. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
- Biosynthesis of natural products by microbial iterative hybrid PKS–NRPS
- (2013) Katja Maria Fisch RSC Advances
- Culture-dependent and independent approaches for identifying novel halogenases encoded by Crambe crambe (marine sponge) microbiota
- (2013) Başak Öztürk et al. Scientific Reports
- Metatranscriptomic and functional metagenomic analysis of methylphosphonate utilization by marine bacteria
- (2013) Asunción Martínez et al. Frontiers in Microbiology
- Bias problems in culture-independent analysis of environmental bacterial communities: a representative study on hydrocarbonoclastic bacteria
- (2013) Husain Al-Awadhi et al. SpringerPlus
- Characterization of a new oxidant-stable serine protease isolated by functional metagenomics
- (2013) Sophie Biver et al. SpringerPlus
- Extracellular Production of Novel Halotolerant, Thermostable, and Alkali-Stable Carboxymethyl Cellulase by Marine Bacterium Marinimicrobium sp. LS-A18
- (2012) Kun Zhao et al. APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
- Production of xylanase by an alkaline-tolerant marine-derived Streptomyces viridochromogenes strain and improvement by ribosome engineering
- (2012) Zhuo Liu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Indigenous hydrocarbon-utilizing bacterioflora in oil-polluted habitats in Kuwait, two decades after the greatest man-made oil spill
- (2012) H. Al-Awadhi et al. ARCHIVES OF MICROBIOLOGY
- Synthetic biological approaches to natural product biosynthesis
- (2012) Jaclyn M Winter et al. CURRENT OPINION IN BIOTECHNOLOGY
- Heterologous production of polyketides by modular type I polyketide synthases in Escherichia coli
- (2012) Satoshi Yuzawa et al. CURRENT OPINION IN BIOTECHNOLOGY
- Combinatorial biosynthesis of polyketides—a perspective
- (2012) Fong T Wong et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments
- (2012) Runar Stokke et al. ENVIRONMENTAL MICROBIOLOGY
- Genomic sequence-based discovery of novel angucyclinone antibiotics from marine Streptomyces sp. W007
- (2012) Hongyu Zhang et al. FEMS MICROBIOLOGY LETTERS
- A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters
- (2012) Timothy J Williams et al. ISME Journal
- Growing Unculturable Bacteria
- (2012) E. J. Stewart JOURNAL OF BACTERIOLOGY
- Marine Proteomics: A Critical Assessment of an Emerging Technology
- (2012) Marc Slattery et al. JOURNAL OF NATURAL PRODUCTS
- Genomic Mining for Novel FADH2-Dependent Halogenases in Marine Sponge-Associated Microbial Consortia
- (2012) Kristina Bayer et al. MARINE BIOTECHNOLOGY
- Assessment of the Bacteriocinogenic Potential of Marine Bacteria Reveals Lichenicidin Production by Seaweed-Derived Bacillus spp.
- (2012) Maria Luz Prieto et al. Marine Drugs
- Antiviral Activities and Putative Identification of Compounds in Microbial Extracts from the Hawaiian Coastal Waters
- (2012) Jing Tong et al. Marine Drugs
- Isolation identification and biochemical characterization of a novel halo-tolerant lipase from the metagenome of the marine sponge Haliclona simulans
- (2012) Joseph Selvin et al. Microbial Cell Factories
- Culture-Dependent and Independent Studies of Microbial Diversity in Highly Copper-Contaminated Chilean Marine Sediments
- (2012) Ludovic Besaury et al. MICROBIAL ECOLOGY
- Evidence of bacteriophage-mediated horizontal transfer of bacterial 16S rRNA genes in the viral metagenome of the marine sponge Hymeniacidon perlevis
- (2012) C. Harrington et al. MICROBIOLOGY-SGM
- Next-generation sequencing technologies for environmental DNA research
- (2012) SHADI SHOKRALLA et al. MOLECULAR ECOLOGY
- 2-Deoxystreptamine-containing aminoglycoside antibiotics: Recent advances in the characterization and manipulation of their biosynthetic pathways
- (2012) Sung Ryeol Park et al. NATURAL PRODUCT REPORTS
- Enhanced multiplex genome engineering through co-operative oligonucleotide co-selection
- (2012) Peter A. Carr et al. NUCLEIC ACIDS RESEARCH
- Heterologous Production of 4-O-Demethylbarbamide, a Marine Cyanobacterial Natural Product
- (2012) Eun Ji Kim et al. ORGANIC LETTERS
- Examining the Fish Microbiome: Vertebrate-Derived Bacteria as an Environmental Niche for the Discovery of Unique Marine Natural Products
- (2012) Laura M. Sanchez et al. PLoS One
- Phylogenetic and Functional Metagenomic Profiling for Assessing Microbial Biodiversity in Environmental Monitoring
- (2012) Veljo Kisand et al. PLoS One
- Informatic strategies for the discovery of polyketides and nonribosomal peptides
- (2012) Chad Johnston et al. MedChemComm
- Synthetic Biology of Antimicrobial Discovery
- (2012) Bijan Zakeri et al. ACS Synthetic Biology
- TREX: A Universal Tool for the Transfer and Expression of Biosynthetic Pathways in Bacteria
- (2012) Anita Loeschcke et al. ACS Synthetic Biology
- Isolation and initial characterization of a novel type of Baeyer-Villiger monooxygenase activity from a marine microorganism
- (2012) Andrew Willetts et al. Microbial Biotechnology
- Meta-omic Characterization of the Marine Invertebrate Microbial Consortium That Produces the Chemotherapeutic Natural Product ET-743
- (2011) Christopher M. Rath et al. ACS Chemical Biology
- Systematics-guided bioprospecting for bioactive microbial natural products
- (2011) Xueting Liu et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Genetic Screening Strategy for Rapid Access to Polyether Ionophore Producers and Products in Actinomycetes
- (2011) Hao Wang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Molecular cloning and characterization of a new cold-active esterase from a deep-sea metagenomic library
- (2011) Chengzhang Fu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Identification of a new subfamily of salt-tolerant esterases from a metagenomic library of tidal flat sediment
- (2011) Jeong Ho Jeon et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Identification and characterization of novel esterases from a deep-sea sediment metagenome
- (2011) Xiawei Jiang et al. ARCHIVES OF MICROBIOLOGY
- Effective gene collection from the metatranscriptome of marine microorganisms
- (2011) Atsushi Ogura et al. BMC GENOMICS
- Marine sponges and their microbial symbionts: love and other relationships
- (2011) Nicole S. Webster et al. ENVIRONMENTAL MICROBIOLOGY
- Transcriptional responses of surface water marine microbial assemblages to deep-sea water amendment
- (2011) Yanmei Shi et al. ENVIRONMENTAL MICROBIOLOGY
- A high-throughput screen to identify novel calcineurin inhibitors
- (2011) Lekha Menon Margassery et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Proteomics-Based Discovery of Koranimine, a Cyclic Imine Natural Product
- (2011) Bradley S. Evans et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Statistical Research on Marine Natural Products Based on Data Obtained between 1985 and 2008
- (2011) Gu-Ping Hu et al. Marine Drugs
- Marine Biocatalysts: Enzymatic Features and Applications
- (2011) Antonio Trincone Marine Drugs
- Marine natural products
- (2011) John W. Blunt et al. NATURAL PRODUCT REPORTS
- antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
- (2011) Marnix H. Medema et al. NUCLEIC ACIDS RESEARCH
- Transcriptome Fingerprinting Analysis: An Approach to Explore Gene Expression Patterns in Marine Microbial Communities
- (2011) Montserrat Coll-Lladó et al. PLoS One
- Culture-independent and -dependent methods to investigate the diversity of planktonic bacteria in the northern Bering Sea
- (2011) Yinxin Zeng et al. POLAR BIOLOGY
- Functional analysis of environmental DNA-derived type II polyketide synthases reveals structurally diverse secondary metabolites
- (2011) Z. Feng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Precise Manipulation of Chromosomes in Vivo Enables Genome-Wide Codon Replacement
- (2011) Farren J. Isaacs et al. SCIENCE
- Cloning-Independent Expression and Analysis of -Transaminases by Use of a Cell-Free Protein Synthesis System
- (2010) Y.-C. Kwon et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Production of a New Thiopeptide Antibiotic, TP-1161, by a Marine Nocardiopsis Species
- (2010) K. Engelhardt et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A bacterial laccase from marine microbial metagenome exhibiting chloride tolerance and dye decolorization ability
- (2010) Zemin Fang et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- A nitrilase from a metagenomic library acts regioselectively on aliphatic dinitriles
- (2010) Sally Bayer et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Engineered polyketide biosynthesis and biocatalysis in Escherichia coli
- (2010) Xue Gao et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- BACTIBASE second release: a database and tool platform for bacteriocin characterization
- (2010) Riadh Hammami et al. BMC MICROBIOLOGY
- Approaches for novel enzyme discovery from marine environments
- (2010) Hyun Sook Lee et al. CURRENT OPINION IN BIOTECHNOLOGY
- Proteomic analysis of polyketide and nonribosomal peptide biosynthesis
- (2010) Jordan L Meier et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Recent application of metagenomic approaches toward the discovery of antimicrobials and other bioactive small molecules
- (2010) Jacob J Banik et al. CURRENT OPINION IN MICROBIOLOGY
- Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction
- (2010) Robert M Morris et al. ISME Journal
- Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges
- (2010) Alexander Siegl et al. ISME Journal
- Engineering Fluorometabolite Production: Fluorinase Expression inSalinispora tropicaYields Fluorosalinosporamide†
- (2010) Alessandra S. Eustáquio et al. JOURNAL OF NATURAL PRODUCTS
- Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism
- (2010) Jonathan Kennedy et al. Marine Drugs
- Immense Essence of Excellence: Marine Microbial Bioactive Compounds
- (2010) Ira Bhatnagar et al. Marine Drugs
- Metabolic engineering of Agrobacterium sp. strain ATCC 31749 for production of an α-Gal epitope
- (2010) Anne M Ruffing et al. Microbial Cell Factories
- Methods and options for the heterologous production of complex natural products
- (2010) Haoran Zhang et al. NATURAL PRODUCT REPORTS
- Synthetic biology: applications come of age
- (2010) Ahmad S. Khalil et al. NATURE REVIEWS GENETICS
- SBSPKS: structure based sequence analysis of polyketide synthases
- (2010) Swadha Anand et al. NUCLEIC ACIDS RESEARCH
- Manufacturing Molecules Through Metabolic Engineering
- (2010) J. D. Keasling SCIENCE
- An Orthogonal Active Site Identification System (OASIS) for Proteomic Profiling of Natural Product Biosynthesis
- (2009) Jordan L. Meier et al. ACS Chemical Biology
- The Biosynthetic Logic of Polyketide Diversity
- (2009) Christian Hertweck ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Isolation and Characterization of Metalloproteases with a Novel Domain Structure by Construction and Screening of Metagenomic Libraries
- (2009) T. Waschkowitz et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- MARTA: a suite of Java-based tools for assigning taxonomic status to DNA sequences
- (2009) Matthew Horton et al. BIOINFORMATICS
- Automated genome mining for natural products
- (2009) Michael HT Li et al. BMC BIOINFORMATICS
- Deciphering Pactamycin Biosynthesis and Engineered Production of New Pactamycin Analogues
- (2009) Takuya Ito et al. CHEMBIOCHEM
- The chemical biology of modular biosynthetic enzymes
- (2009) Jordan L. Meier et al. CHEMICAL SOCIETY REVIEWS
- A culture-dependent bacterial community structure analysis based on liquid cultivation and its application to a marine environment
- (2009) Toru Shigematsu et al. FEMS MICROBIOLOGY LETTERS
- Synthesis of Methyl Halides from Biomass Using Engineered Microbes
- (2009) Travis S. Bayer et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Metagenomic approaches to natural products from free-living and symbiotic organisms
- (2009) Sean F. Brady et al. NATURAL PRODUCT REPORTS
- Programming cells by multiplex genome engineering and accelerated evolution
- (2009) Harris H. Wang et al. NATURE
- A proteomics approach to discovering natural products and their biosynthetic pathways
- (2009) Stefanie B Bumpus et al. NATURE BIOTECHNOLOGY
- Drug Discovery and Natural Products: End of an Era or an Endless Frontier?
- (2009) J. W.-H. Li et al. SCIENCE
- Microarray-Based Characterization of Microbial Community Functional Structure and Heterogeneity in Marine Sediments from the Gulf of Mexico
- (2008) L. Wu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Identification of two novel esterases from a marine metagenomic library derived from South China Sea
- (2008) Xinmin Chu et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
- (2008) F Meyer et al. BMC BIOINFORMATICS
- The RAST Server: Rapid Annotations using Subsystems Technology
- (2008) Ramy K Aziz et al. BMC GENOMICS
- Diversity of microbes associated with the marine sponge, Haliclona simulans, isolated from Irish waters and identification of polyketide synthase genes from the sponge metagenome
- (2008) Jonathan Kennedy et al. ENVIRONMENTAL MICROBIOLOGY
- Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology
- (2008) Cindy J. Smith et al. FEMS MICROBIOLOGY ECOLOGY
- Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea
- (2008) Sarah M Sowell et al. ISME Journal
- Genome Sequence of the Streptomycin-Producing Microorganism Streptomyces griseus IFO 13350
- (2008) Y. Ohnishi et al. JOURNAL OF BACTERIOLOGY
- The Screening of Antimicrobial Bacteria with Diverse Novel Nonribosomal Peptide Synthetase (NRPS) Genes from South China Sea Sponges
- (2008) Wei Zhang et al. MARINE BIOTECHNOLOGY
- Non-ribosomal peptide synthetase module fusions to produce derivatives of daptomycin in Streptomyces roseosporus
- (2008) S. Doekel et al. MICROBIOLOGY-SGM
- SAR11 marine bacteria require exogenous reduced sulphur for growth
- (2008) H. James Tripp et al. NATURE
- Substrate-induced gene expression (SIGEX) screening of metagenome libraries
- (2008) Taku Uchiyama et al. Nature Protocols
- Cultivating previously uncultured soil bacteria using a soil substrate membrane system
- (2008) Belinda C Ferrari et al. Nature Protocols
- Efficient transfer of two large secondary metabolite pathway gene clusters into heterologous hosts by transposition
- (2008) Jun Fu et al. NUCLEIC ACIDS RESEARCH
- A latitudinal diversity gradient in planktonic marine bacteria
- (2008) J. A. Fuhrman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started