Article
Chemistry, Multidisciplinary
Istvan Timari, Peter Bagi, Gyorgy Keglevich, Katalin E. Kover
Summary: The original homonuclear decoupled experiments are suitable for compounds with low natural isotopic abundance of NMR-active heteronuclei, while molecules with highly abundant heteronuclei result in more complex spectra with overlapping signals, which may hinder the accurate assignment of resonances. New heteronuclear decoupled experiments, such as HD PSYCHE 1H and TOCSY, provide simplified spectra with significantly increased resolution and allow reliable assessment of individual resonances. These methods have been successfully applied to the structure elucidation of a challenging stereoisomeric mixture, and they have potential applications in medicinal chemistry and metabolomics for other important compounds containing 31P or 19F.
Article
Chemistry, Physical
Mwadham M. Kabandaa, Indra Bahadur
Summary: In this theoretical study, the preferred geometry arrangement of the cation/anion units in the [EMIM][DCA] ionic liquid and its interaction with a water co-solvent molecule were investigated for the first time. DFT and MP2 methods were used for comparison. The results showed that the cation/anion units in the ionic liquid are mainly stabilized by a combination of hydrogen bonding and dispersion interactions.
JOURNAL OF MOLECULAR LIQUIDS
(2023)
Article
Chemistry, Physical
Peidong Song, Linlin Hu, Tao Yu, Jiao Jiao, Yangqing He, Liang Xu, Pengfei Li
Summary: This study introduces a new tunable chiral pyridine framework, which is successfully applied in a highly selective iridium-catalyzed reaction with high yields. Experimental and theoretical investigations demonstrate the excellent performance of this framework, which can be used in the synthesis of chiral protonated compounds.
Article
Chemistry, Inorganic & Nuclear
Huiyeong Ju, Aya Matsu-ura, Hiroki Uchiyama, Hiroki Horita, Mari Ikeda, Shunsuke Kuwahara, Yoichi Habata
Summary: The structures of silver(I) complexes with unsymmetrical tert-amide-containing pyridine ligand isomers were determined. The ratios and rotational barriers of different forms of these ligands in solution were estimated. The solid-state structures of the silver(I) complexes were found to be all in s-trans form, despite the presence of different forms in solution. The coordination networks of these complexes varied depending on the direction of the pyridine nitrogen.
INORGANICA CHIMICA ACTA
(2022)
Article
Chemistry, Multidisciplinary
Feng Hu, Rui-Lin He, Zong-Jie Guan, Chun-Yu Liu, Quan-Ming Wang
Summary: The reduction of alkynyl-silver and phosphine-silver precursors with weak reducing reagent Ph2SiH2 resulted in the formation of a novel silver nanocluster with the largest structure known so far. This disc-shaped cluster contains a Ag-69 kernel consisting of a bicapped hexagonal prismatic Ag-15 unit wrapped by six Ino decahedra through edge-sharing. The use of Ino decahedra as building blocks for a cluster of clusters is a first. The study also reveals that the central silver atom has a coordination number of 14, the highest in metal nanoclusters, and provides insights into metal cluster assembling mechanisms.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
(2023)
Article
Chemistry, Multidisciplinary
Junyang Yin, Jie Zhang, Zhenzi Wu, Feng Wu, Xiong Li, Jiangnan Dai, Changqing Chen
Summary: Recent research has discovered a new approach to in situ synthesis of water-stable perovskite quantum dots through ligand engineering. The study reveals that zwitterionic ligands anchored on the quantum dots surface can prevent water penetration. By investigating the crystallization process and surface defect passivation of the quantum dots, high photoluminescence quantum yields have been achieved.
Article
Chemistry, Inorganic & Nuclear
Dan Song, Jing Chen, Rui Wang, Zhenguo Guo, Jianhui Xie, Yingying Liu
Summary: In this study, the water oxidation of Ru WOCs with different substituents on the ligands was investigated. The proposed water oxidation mechanism involves the bimolecular coupling of two seven-coordinate Ru=O species. The use of bulky phenyl groups helps stabilize the high oxidation Ru-oxo intermediates.
EUROPEAN JOURNAL OF INORGANIC CHEMISTRY
(2023)
Article
Chemistry, Physical
Stefano Racioppi, Laura Orian, Cristina Tubaro, Armando Gennaro, Abdirisak Ahmed Isse
Summary: The equilibrium of copper-catalyzed atom transfer radical polymerization was investigated using computer simulation to explain the observed solvent effect. The study found that a continuum model for solvation was not sufficient, but including solvent molecules in the coordination sphere of the copper species and using a continuum description of the medium yielded a solvent-dependent thermodynamics in agreement with experimental trends.
Article
Multidisciplinary Sciences
Rashid Javaid, Aziz Ul Rehman, Manan Ahmed, Mohammad Hashemi Karouei, Nima Sayyadi
Summary: This study presents the design and synthesis of unsymmetric ligands based on pyridine-pyrazolate scaffold for achieving a large Stokes shift. The resulting boron complexes exhibit intermolecular charge transfer, leading to a significant Stokes shift and maintaining high quantum efficiency and chemical stability. The photophysical properties of derivatization of pyrazolate group in the ligands were explored, allowing the discovery of potential sensing applications based on H-Bond quenching.
SCIENTIFIC REPORTS
(2022)
Article
Chemistry, Medicinal
Agnieszka Sadlej, Jaroslaw Jazwinski
Summary: Complexation in situ of 1-methylpiperidine, racemic 1,2-dimethylpyrrolidin, and racemic 1,2-dimethylpiperidine with rhodium(II) tetracarboxylates in chloroform was studied, revealing the formation of different complexes and changes in ligand conformations.
Article
Chemistry, Multidisciplinary
Nasser Nasser, Richard J. Puddephatt
Summary: Through crystallographic characterization, a mixture of gold(III) complexes, including an amide complex [AuCl2{& κ;2-N,N'-2-C5H4NC(=O)N(t-Bu)] and an aldolate complex [AuCl2{& κ;2-N,O-2-C5H4NCH(OMe)O)], was obtained by recrystallization of the oxaziridine derivative 2-t-butyl-3-(2-pyridinyl)oxaziridine with Na[AuCl4].2H2O from a solvent mixture containing methanol. It is suggested that these products are formed after O-N or C-N bond cleavage of the strained oxaziridine ring upon coordination to the gold(III) center. NMR spectroscopic monitoring showed that O-N bond cleavage of the oxaziridine ring was favored in the presence of a protic solvent. Coordination of an oxaziridine to gold(III) can result in N-O or C-O bond cleavage, yielding an amide or an aldolate complex of gold(III), respectively.
Article
Chemistry, Inorganic & Nuclear
Junho Kim, Yoonsu Park, Paul J. Chirik
Summary: Piano-stool iridium hydride complexes with phenylpyridine ligands are effective in promoting element-hydrogen bond formation using H-2 as a H-atom source. Blue light irradiation enhances the catalyst turnover for iridium-catalyzed hydrogenation of aryloxyl radicals. The reaction involves proton-coupled electron transfer and formation of an iridium compound. Blue light irradiation with H-2 releases a free heterocycle and regenerates the iridium hydride precatalyst, leading to increased turnover.
INORGANIC CHEMISTRY
(2023)
Article
Chemistry, Inorganic & Nuclear
Darius Dumitra, Alexandra Pop, Anca Silvestru
Summary: New pyridine-based ligands with organoselenium groups were synthesized and used to form corresponding metal complexes with gold(I) and silver(I) ions. The coordination behavior of the ligands was studied using NMR spectroscopy and mass spectrometry. X-ray crystallography revealed different coordination modes of the ligands in the metal complexes. The metal complexes exhibited metallophilic interactions in the solid state.
Article
Chemistry, Multidisciplinary
Yazi Liu, Yue Sun, En Zhao, Weiwei Yang, Jinkai Lin, Qiang Zhong, Haifeng Qi, Aixin Deng, Shaogui Yang, Huayang Zhang, Huan He, Shaomin Liu, Zupeng Chen, Shaobin Wang
Summary: This study reports the preparation of atomically dispersed Co-Ag dual-metal sites anchored on P-doped carbon nitride (Co1Ag1-PCN) via supramolecular and solvothermal approaches, which exhibit desirable performance for photocatalytic H-2 evolution from water splitting. The optimized Co1Ag1-PCN catalyst achieves a remarkable hydrogen production rate of 1190 mu mol g(-1) h(-1) with an apparent quantum yield (AQY) of 1.49% at 365 nm, surpassing most of the newly reported metal-N-coordinated photocatalysts. The enhanced photocatalytic activity is attributed to the synergistic effect of Co-Ag dual sites with exclusive coordination configuration of Co-N-6 and Ag-N2C2, which enhances the charge density and facilitates the formation of H* intermediates.
ADVANCED FUNCTIONAL MATERIALS
(2023)
Article
Chemistry, Multidisciplinary
Yannick T. Boni, Ryan C. Cammarota, Kuangbiao Liao, Matthew S. Sigman, Huw M. L. Davies
Summary: In this work, C-H functionalization of silyl ethers via carbene-induced C-H insertion has been achieved, providing an efficient synthetic disconnection strategy. The use of different catalyst preferences has enabled site- and stereoselective functionalization at different positions relative to the siloxy group. Additionally, a machine learning model has been developed to predict the major product, aiding in the application of these methods to new substrates.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
(2022)
Article
Chemistry, Medicinal
Yunhui Ge, Si Zhang, Mate Erdelyi, Vincent A. Voelz
Summary: Understanding mechanisms of protein folding and binding is crucial for designing their molecular function. MD simulations and MSM approaches provide a powerful way to understand complex conformational changes over long time scales. The study investigated the role of preorganization in peptide binding to protein targets, revealing a significant relationship between the relative preorganization of each ligand in solution and its affinity for MDM2.
JOURNAL OF CHEMICAL INFORMATION AND MODELING
(2021)
Article
Chemistry, Organic
Elena Reutskaya, Alexander Sapegin, Stefan Peintner, Mate Erdelyi, Mikhail Krasavin
Summary: The mechanism of a thiazepinone ring expansion reaction was investigated, revealing that sulfone derivatives exhibit a higher rate of ring expansion compared to thioethers. Additionally, in certain cases, the cis- and trans-isomers of the resulting products were found to be stabilized through intramolecular hydrogen bonds.
JOURNAL OF ORGANIC CHEMISTRY
(2021)
Article
Chemistry, Multidisciplinary
Stefan Kuhn, Lianne H. E. Wieske, Paul Trevorrow, Daniel Schoeber, Nils E. Schloerer, Jean-Marc Nuzillard, Pavel Kessler, Jochen Junker, Angel Herraez, Christophe Fares, Mate Erdelyi, Damien Jeannerat
Summary: The NMReDATA format is proposed as a standardized way to store and exchange NMR data and metadata of chemical compounds. This paper discusses analytical workflows utilizing the NMReDATA format and provides a repository of sample data for validating software packages.
MAGNETIC RESONANCE IN CHEMISTRY
(2021)
Article
Chemistry, Medicinal
Fabio Begnini, Vasanthanathan Poongavanam, Yoseph Atilaw, Mate Erdelyi, Stefan Schiesser, Jan Kihlberg
Summary: Conformation-dependent 3D descriptors have been shown to provide better predictions of the physicochemical properties of macrocycles than 2D descriptors. Calculating descriptors from solution-phase conformational ensembles and conformational sampling can be useful for ranking the cell permeability of macrocycles and contributing to their prioritization in lead optimization. Such methods may allow for the accurate ranking of passive permeability for moderately flexible macrocycles.
ACS MEDICINAL CHEMISTRY LETTERS
(2021)
Article
Chemistry, Multidisciplinary
Sofia Lindblad, Flora Boroka Nemeth, Tamas Foldes, Daniel von der Heiden, Herh G. Vang, Zakarias L. Driscoll, Emily R. Gonnering, Imre Papai, Nathan Bowling, Mate Erdelyi
Summary: (English Summary)
The study investigates the stability and reactivity of halonium ions stabilized by [bis(pyridine)iodine(I)](+) complexes. Factors such as chelation, strain, steric hindrance, and electrostatic interaction were found to influence the structure and release rate of these ions. Additionally, the presence of an electron-rich moiety nearby the [N-I-N](+) motif was observed to increase the iodenium release rate.
CHEMISTRY-A EUROPEAN JOURNAL
(2021)
Article
Chemistry, Medicinal
Thobias M. Kalenga, Monica M. Ndoile, Yoseph Atilaw, Joan J. E. Munissi, Pieter J. Gilissen, Anastasia Rudenko, Catarina Bourgard, Per Sunnerhagen, Stephen S. Nyandoro, Mate Erdelyi
Summary: New isoflavonoid and biflavonoid compounds, kirkinone A and kirkinone B, were isolated from Ochna kirkii root bark methanolic extract, showing antibacterial and cytotoxic activities but no activity against Escherichia coli.
Article
Chemistry, Multidisciplinary
Stefan Peintner, Mate Erdelyi
Summary: This study introduces a strategy for accurate experimental description of weak chemical forces in solution, demonstrating its scope and effectiveness through experiments. The methodology utilizes entropic advantage and ensemble analysis to describe the orientation of weak force interactions, and derives thermodynamic constants through temperature-dependent chemical shift analysis.
CHEMISTRY-A EUROPEAN JOURNAL
(2022)
Article
Chemistry, Multidisciplinary
Maria Quant, Andreas Erbs Hillers-Bendtsen, Shima Ghasemi, Mate Erdelyi, Zhihang Wang, Lidiya M. Muhammad, Nina Kann, Kurt Mikkelsen, Kasper Moth-Poulsen
Summary: This study presents a novel cross-coupling reaction strategy for the efficient synthesis of a series of new BOD compounds, capable of reversible transformation into TCOs with minimal degradation over multiple cycles. Computational and experimental findings demonstrate the potential for designing future BOD/TCO systems with tailored properties, showing higher storage energies compared to norbornadiene.
Article
Chemistry, Medicinal
Lianne H. E. Wieske, Jonathan Bogaerts, Albin A. M. Leding, Scott Wilcox, Anna Andersson Rasmussen, Kinga Leszczak, Lotta Turunen, Wouter A. Herrebout, Madlen Hubert, Annette Bayer, Mate Erdelyi
Summary: Carbapenem resistance caused by metallo-beta-lactamases is a serious global challenge. In this study, the backbone NMR resonance assignment of VIM-2 was disclosed, providing possibilities for studying this important enzyme and its potential inhibitors.
ACS MEDICINAL CHEMISTRY LETTERS
(2022)
Article
Chemistry, Multidisciplinary
Katarzyna Palica, Manuela Voracova, Susann Skagseth, Anna Andersson Rasmussen, Lisa Allander, Madlen Hubert, Linus Sandegren, Hanna-Kirstirep Schroder Leiros, Hanna Andersson, Mate Erdelyi
Summary: Infectious diseases remain a major concern for public health in the 21st century, and the development of antimicrobial resistance by microbes is a significant problem. The study found that phosphonamidate compounds have the potential to become a new generation of antibiotic therapeutics to combat metallo-beta-lactamase-resistant bacteria.
Article
Chemistry, Medicinal
Gasper Maeda, Pieter J. Gilissen, Catarina Bourgard, Jelle van der Wal, Joan J. E. Munissi, Stephen S. Nyandoro, Mate Erdelyi
Summary: Several compounds were isolated from the leaves of Uvaria pandensis Verdc., showing antibacterial and cytotoxic activities.
Article
Chemistry, Multidisciplinary
Scott Wilcox, Daniel Sethio, Jas S. Ward, Antonio Frontera, Roland Lindh, Kari Rissanen, Mate Erdelyi
Summary: The interaction between a [bis(pyridine)iodine(i)](+) cation and a [bis(pyridine)silver(i)](+) cation, where an iodonium ion acts as a nucleophile by transferring electron density to the silver(i) cation, is reinvestigated in this study. No measurable interaction is observed between the cationic species in solution using NMR. DFT calculations suggest that any attractive interaction between these complexes in solution is primarily due to the pi-pi interaction of pyridines.
CHEMICAL COMMUNICATIONS
(2022)
Meeting Abstract
Biophysics
Thi Dung Nguyen, Robert Raddi, Mate Erdelyi, Vincent Voelz
BIOPHYSICAL JOURNAL
(2022)
Article
Chemistry, Organic
Daniel von der Heiden, Flora Boroka Nemeth, Mans Andreasson, Daniel Sethio, Imre Papai, Mate Erdelyi
Summary: This research explores the applicability of enantioselective halofunctionalization and proposes six novel chiral ligands. It is found that substrate preorganization by the chiral catalyst is necessary for enantioselective reactions.
ORGANIC & BIOMOLECULAR CHEMISTRY
(2021)
Article
Chemistry, Multidisciplinary
Stefan Peintner, Mate Erdelyi
Summary: This article presents a strategy for accurately describing weak chemical forces in solution, demonstrating the geometric and thermodynamic characterization of the weak halogen bond. By using a combination of NOE- and RDC-based ensemble analyses, this methodology allows for the precise orientation of donor and acceptor sites to be determined, paving the way for improved understanding and strategic use of weak forces in chemistry and biology.
CHEMISTRY-A EUROPEAN JOURNAL
(2022)