Chemical cross-linking and mass spectrometry to determine the subunit interaction network in a recombinant human SAGA HAT subcomplex

A Proteome-Scale Map of the Human Interactome Network

(2014) Thomas Rolland et al.   CELL

Function and dynamics of macromolecular complexes explored by integrative structural and computational biology

(2014) Michael D Purdy et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Architecture of the Saccharomyces cerevisiae SAGA transcription coactivator complex

(2014) Y. Han et al.   EMBO JOURNAL

Integrative computational modeling of protein interactions

(2014) João P. G. L. M. Rodrigues et al.   FEBS Journal

Integrative Structure–Function Mapping of the Nucleoporin Nup133 Suggests a Conserved Mechanism for Membrane Anchoring of the Nuclear Pore Complex

(2014) Seung Joong Kim et al.   MOLECULAR & CELLULAR PROTEOMICS

The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics

(2014) Francesco Lanucara et al.   Nature Chemistry

Analysis of Nidogen-1/Laminin γ1 Interaction by Cross-Linking, Mass Spectrometry, and Computational Modeling Reveals Multiple Binding Modes

(2014) Philip Lössl et al.   PLoS One

NMR approaches for structural analysis of multidomain proteins and complexes in solution

(2014) Christoph Göbl et al.   PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

Distance restraints from crosslinking mass spectrometry: Mining a molecular dynamics simulation database to evaluate lysine-lysine distances

(2014) Eric D. Merkley et al.   PROTEIN SCIENCE

Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers

(2013) Lutz Fischer et al.   Journal of Proteomics

Architecture of an RNA Polymerase II Transcription Pre-Initiation Complex

(2013) K. Murakami et al.   SCIENCE

Protein Interfaces of the Conserved Nup84 Complex from Chaetomium thermophilum Shown by Crosslinking Mass Spectrometry and Electron Microscopy

(2013) Karsten Thierbach et al.   STRUCTURE

Structural insights into transcription initiation by RNA polymerase II

(2013) Sebastian Grünberg et al.   TRENDS IN BIOCHEMICAL SCIENCES

ATAC-king the complexity of SAGA during evolution

(2012) G. Spedale et al.   GENES & DEVELOPMENT

Two decades of studying non-covalent biomolecular assemblies by means of electrospray ionization mass spectrometry

(2012) G. R. Hilton et al.   Journal of the Royal Society Interface

Identification of cross-linked peptides from complex samples

(2012) Bing Yang et al.   NATURE METHODS

Subunit order of eukaryotic TRiC/CCT chaperonin by cross-linking, mass spectrometry, and combinatorial homology modeling

(2012) N. Kalisman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chemical cross-linkers for protein structure studies by mass spectrometry

(2012) David Paramelle et al.   PROTEOMICS

Optimizing the enrichment of cross-linked products for mass spectrometric protein analysis

(2012) Romy Fritzsche et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation

(2011) Chuanbing Bian et al.   EMBO JOURNAL

Transcriptional Regulation inSaccharomyces cerevisiae: Transcription Factor Regulation and Function, Mechanisms of Initiation, and Roles of Activators and Coactivators

(2011) Steven Hahn et al.   GENETICS

CrossWork: Software-assisted identification of cross-linked peptides

(2011) Morten I. Rasmussen et al.   Journal of Proteomics

StavroX—A Software for Analyzing Crosslinked Products in Protein Interaction Studies

(2011) Michael Götze et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Joining Forces: Integrating Proteomics and Cross-linking with the Mass Spectrometry of Intact Complexes

(2011) Florian Stengel et al.   MOLECULAR & CELLULAR PROTEOMICS

Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes

(2011) K. K. Lee et al.   Molecular Systems Biology

Chemical Cross-Linking and Mass Spectrometry As a Low-Resolution Protein Structure Determination Technique

(2010) Pragya Singh et al.   ANALYTICAL CHEMISTRY

Quantitative Interaction Proteomics and Genome-wide Profiling of Epigenetic Histone Marks and Their Readers

(2010) Michiel Vermeulen et al.   CELL

New baculovirus expression tools for recombinant protein complex production

(2010) Simon Trowitzsch et al.   JOURNAL OF STRUCTURAL BIOLOGY

The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes

(2010) Juri Rappsilber   JOURNAL OF STRUCTURAL BIOLOGY

Probing Native Protein Structures by Chemical Cross-linking, Mass Spectrometry, and Bioinformatics

(2010) Alexander Leitner et al.   MOLECULAR & CELLULAR PROTEOMICS

The Genetic Landscape of a Cell

(2010) M. Costanzo et al.   SCIENCE

A new generation of cross-linkers for selective detection by MALDI MS

(2009) David Paramelle et al.   PROTEOMICS

Protein structure and dynamics studied by mass spectrometry: H/D exchange, hydroxyl radical labeling, and related approaches

(2008) Lars Konermann et al.   JOURNAL OF MASS SPECTROMETRY

Utility of formaldehyde cross-linking and mass spectrometry in the study of protein–protein interactions

(2008) Brent W. Sutherland et al.   JOURNAL OF MASS SPECTROMETRY

The STAGA Subunit ADA2b Is an Important Regulator of Human GCN5 Catalysis

(2008) A. M. Gamper et al.   MOLECULAR AND CELLULAR BIOLOGY

Erratum: Corrigendum: Identification of cross-linked peptides from large sequence databases

(2008) Oliver Rinner et al.   NATURE METHODS

Native mass spectrometry: a bridge between interactomics and structural biology

(2008) Albert J R Heck   NATURE METHODS