On the lack of polymorphism in Aβ-peptide aggregates derived from patient brains

The Molecular Structure of Alzheimer β-Amyloid Fibrils Formed in the Presence of Phospholipid Vesicles

(2014) Zheng Niu et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Mechanism of Amyloid-β Fibril Elongation

(2014) Thomas Gurry et al.   BIOCHEMISTRY

Stability of Iowa mutant and wild type Aβ-peptide aggregates

(2014) Erik J. Alred et al.   JOURNAL OF CHEMICAL PHYSICS

Simulations of Protein Aggregation: Insights from Atomistic and Coarse-Grained Models

(2014) Alex Morriss-Andrews et al.   Journal of Physical Chemistry Letters

The amyloid state and its association with protein misfolding diseases

(2014) Tuomas P. J. Knowles et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Spreading of amyloid-β peptides via neuritic cell-to-cell transfer is dependent on insufficient cellular clearance

(2014) Jakob Domert et al.   NEUROBIOLOGY OF DISEASE

Local interactions influence the fibrillation kinetics, structure and dynamics of Aβ(1–40) but leave the general fibril structure unchanged

(2014) Juliane Adler et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Inter-Species Cross-Seeding: Stability and Assembly of Rat - Human Amylin Aggregates

(2014) Workalemahu M. Berhanu et al.   PLoS One

Locating folds of the in-register parallel  -sheet of the Sup35p prion domain infectious amyloid

(2014) A. Gorkovskiy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Physical and structural basis for polymorphism in amyloid fibrils

(2014) Robert Tycko   PROTEIN SCIENCE

In Silico Cross Seeding of Aβ and Amylin Fibril-like Oligomers

(2013) Workalemahu M. Berhanu et al.   ACS Chemical Neuroscience

GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit

(2013) Sander Pronk et al.   BIOINFORMATICS

Computational Assembly of Polymorphic Amyloid Fibrils Reveals Stable Aggregates

(2013) Mohamed Raef Smaoui et al.   BIOPHYSICAL JOURNAL

Molecular Structure of β-Amyloid Fibrils in Alzheimer’s Disease Brain Tissue

(2013) Jun-Xia Lu et al.   CELL

Effect of the amyloid β hairpin's structure on the handedness of helices formed by its aggregates

(2013) Pavan K. GhattyVenkataKrishna et al.   FEBS LETTERS

Mutations and Seeding of Amylin Fibril-Like Oligomers

(2013) Nathan A Bernhardt et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Conformational Stability of Fibrillar Amyloid-Beta Oligomers via Protofilament Pair Formation – A Systematic Computational Study

(2013) Anna Kahler et al.   PLoS One

Atomic structure and hierarchical assembly of a cross-  amyloid fibril

(2013) A. W. P. Fitzpatrick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The stability of cylindrin β-barrel amyloid oligomer models-A molecular dynamics study

(2013) Workalemahu M. Berhanu et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

The Amyloid State of Proteins in Human Diseases

(2012) David Eisenberg et al.   CELL

Mechanisms for the Insertion of Toxic, Fibril-like β-Amyloid Oligomers into the Membrane

(2012) Hyunbum Jang et al.   Journal of Chemical Theory and Computation

Fiber Diffraction Data Indicate a Hollow Core for the Alzheimer's Aβ 3-Fold Symmetric Fibril

(2012) Michele McDonald et al.   JOURNAL OF MOLECULAR BIOLOGY

Structure and Dynamics of Amyloid-β Segmental Polymorphisms

(2012) Workalemahu M. Berhanu et al.   PLoS One

Toxic fibrillar oligomers of amyloid-  have cross-  structure

(2012) J. C. Stroud et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

β-Barrel Mobility Underlies Closure of the Voltage-Dependent Anion Channel

(2012) Ulrich Zachariae et al.   STRUCTURE

Computational Electrophysiology: The Molecular Dynamics of Ion Channel Permeation and Selectivity in Atomistic Detail

(2011) Carsten Kutzner et al.   BIOPHYSICAL JOURNAL

Alternative packing modes leading to amyloid polymorphism in five fragments studied with molecular dynamics

(2011) Workalemahu M. Berhanu et al.   BIOPOLYMERS

The Unique Alzheimer’s β-Amyloid Triangular Fibril Has a Cavity along the Fibril Axis under Physiological Conditions

(2011) Yifat Miller et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Comparative Study of Polymorphous Alzheimer's Aβ(1-40) Amyloid Nanofibrils and Microfibers

(2010) Raffaella Paparcone et al.   Journal of Computational and Theoretical Nanoscience

Models of membrane-bound Alzheimer's Abeta peptide assemblies

(2010) Yinon Shafrir et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

β arcades: recurring motifs in naturally occurring and disease-related amyloid fibrils

(2009) Andrey V. Kajava et al.   FASEB JOURNAL

Isothermal-isobaric molecular dynamics using stochastic velocity rescaling

(2009) Giovanni Bussi et al.   JOURNAL OF CHEMICAL PHYSICS

Chirality of Amyloid Suprastructures

(2008) Noa Rubin et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Molecular structural basis for polymorphism in Alzheimer's  -amyloid fibrils

(2008) A. K. Paravastu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

P-LINCS:  A Parallel Linear Constraint Solver for Molecular Simulation

(2007) Berk Hess   Journal of Chemical Theory and Computation