Expansion of Genotypic Diversity and Establishment of 2009 H1N1 Pandemic-Origin Internal Genes in Pigs in China

North American Triple Reassortant and Eurasian H1N1 Swine Influenza Viruses Do Not Readily Reassort to Generate a 2009 Pandemic H1N1-Like Virus

(2014) W. Ma et al.   mBio

Outbreak of Variant Influenza A(H3N2) Virus in the United States

(2013) M. A. Jhung et al.   CLINICAL INFECTIOUS DISEASES

Systematic phylogenetic analysis of influenza A virus reveals many novel mosaic genome segments

(2013) Tommy Tsan-Yuk Lam et al.   INFECTION GENETICS AND EVOLUTION

Population dynamics of cocirculating swine influenza A viruses in the United States from 2009 to 2012

(2013) Tavis K. Anderson et al.   Influenza and Other Respiratory Viruses

Evolution of the Hemagglutinin Protein of the New Pandemic H1N1 Influenza Virus: Maintaining Optimal Receptor Binding by Compensatory Substitutions

(2013) R. P. de Vries et al.   JOURNAL OF VIROLOGY

The genesis and source of the H7N9 influenza viruses causing human infections in China

(2013) Tommy Tsan-Yuk Lam et al.   NATURE

Reassortants of the pandemic (H1N1) 2009 virus and establishment of a novel porcine H1N2 influenza virus, lineage in Germany

(2013) Jeannette Lange et al.   VETERINARY MICROBIOLOGY

Pandemic Influenza A Viruses Escape from Restriction by Human MxA through Adaptive Mutations in the Nucleoprotein

(2013) Benjamin Mänz et al.   PLoS Pathogens

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evolution of the receptor binding properties of the influenza A(H3N2) hemagglutinin

(2012) Y. P. Lin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Virulence and transmissibility of H1N2 influenza virus in ferrets imply the continuing threat of triple-reassortant swine viruses

(2012) P. N. Q. Pascua et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Isolation of novel triple-reassortant swine H3N2 influenza viruses possessing the hemagglutinin and neuraminidase genes of a seasonal influenza virus in Vietnam in 2010

(2011) Long Thanh Ngo et al.   Influenza and Other Respiratory Viruses

Emergence and Dissemination of a Swine H3N2 Reassortant Influenza Virus with 2009 Pandemic H1N1 Genes in Pigs in China

(2011) X. Fan et al.   JOURNAL OF VIROLOGY

Novel Reassortment of Eurasian Avian-Like and Pandemic/2009 Influenza Viruses in Swine: Infectious Potential for Humans

(2011) H. Zhu et al.   JOURNAL OF VIROLOGY

Reassortment Events among Swine Influenza A Viruses in China: Implications for the Origin of the 2009 Influenza Pandemic

(2011) T. T.-Y. Lam et al.   JOURNAL OF VIROLOGY

Long-term evolution and transmission dynamics of swine influenza A virus

(2011) Dhanasekaran Vijaykrishna et al.   NATURE

Fitness costs limit influenza A virus hemagglutinin glycosylation as an immune evasion strategy

(2011) S. R. Das et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Survey of Branch Support Methods Demonstrates Accuracy, Power, and Robustness of Fast Likelihood-based Approximation Schemes

(2011) Maria Anisimova et al.   SYSTEMATIC BIOLOGY

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

(2010) W. Delport et al.   BIOINFORMATICS

Did the 2009 pandemic influenza virus originate in humans?

(2010) Hana M Weingartl   Future Microbiology

Reassortment of Pandemic H1N1/2009 Influenza A Virus in Swine

(2010) D. Vijaykrishna et al.   SCIENCE

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Novel H1N2 swine influenza reassortant strain in pigs derived from the pandemic H1N1/2009 virus

(2010) Ana Moreno et al.   VETERINARY MICROBIOLOGY

Genetic and Pathobiologic Characterization of Pandemic H1N1 2009 Influenza Viruses from a Naturally Infected Swine Herd

(2009) H. M. Weingartl et al.   JOURNAL OF VIROLOGY

Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic

(2009) Gavin J. D. Smith et al.   NATURE

Pre-existing immunity against swine-origin H1N1 influenza viruses in the general human population

(2009) J. A. Greenbaum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Antigenic and Genetic Characteristics of Swine-Origin 2009 A(H1N1) Influenza Viruses Circulating in Humans

(2009) R. J. Garten et al.   SCIENCE

From where did the 2009 'swine-origin' influenza A virus (H1N1) emerge?

(2009) Adrian J Gibbs et al.   Virology Journal

Smooth Skyride through a Rough Skyline: Bayesian Coalescent-Based Inference of Population Dynamics

(2008) V. N. Minin et al.   MOLECULAR BIOLOGY AND EVOLUTION