Article
Multidisciplinary Sciences
Daiqi Wang, Hongru Wang, Xiaomei Xu, Man Wang, Yahuan Wang, Hong Chen, Fei Ping, Huanhuan Zhong, Zhengkun Mu, Wantong Xie, Xiangyu Li, Jingbin Feng, Milan Zhang, Zhilan Fan, Tifeng Yang, Junliang Zhao, Bin Liu, Ying Ruan, Guiquan Zhang, Chunlin Liu, Ziqiang Liu
Summary: Understanding evolutionary forces in speciation is a key goal in evolutionary biology. This study reveals the presence-absence variation (PAV) at the Se locus as a reproductive barrier between indica and japonica rice subspecies, causing hybrid sterility. The locus contains two adjacent genes: ORF3, which acts as a sporophytic pollen killer, and ORF4, which protects pollen in a gametophytic manner. The PAV has contributed to the reproductive isolation between the two subspecies of Asian cultivated rice. This research provides insights into post-zygotic isolation and may aid in overcoming reproductive barriers in hybrid rice breeding.
NATURE COMMUNICATIONS
(2023)
Article
Cell Biology
G. Ozan Bozdag, Jasmine Ono
Summary: This study reviews recent developments in research on reproductive isolation in yeasts, finding that chromosomal-level mutations are common at the intraspecific level, while anti-recombination-driven chromosome missegregation is the primary reproductive barrier between species. However, all of these postzygotic barriers can be overcome through the asexual life history of hybrids.
CURRENT OPINION IN GENETICS & DEVELOPMENT
(2022)
Article
Biology
Jessica L. McKenzie, H. Andres Araujo, Jack L. Smith, Dolph Schluter, Robert H. Devlin
Summary: Global change is causing unprecedented alterations in ecosystems, potentially leading to hybridization between different species and affecting genetic diversity, adaptive capacity, and evolutionary paths. This study on Chinook and Coho salmon found potential and consequences of hybridization, including postzygotic developmental barriers. Climate change could further influence hybridization between these species, with unknown impacts on the future of these threatened salmon and their habitats.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
(2021)
Article
Plant Sciences
A. Lovisa S. Gustafsson, Galina Gussarova, Liv Borgen, Hajime Ikeda, Alexandre Antonelli, Lucas Marie-Orleach, Loren H. Rieseberg, Christian Brochmann
Summary: This study finds that post-zygotic reproductive isolation is common in Arctic flora, and this may be associated with glacial cycles and selfing mating systems.
Review
Genetics & Heredity
Vladimir E. Adashev, Alexei A. Kotov, Sergei S. Bazylev, Aleksei S. Shatskikh, Alexei A. Aravin, Ludmila Olenina
Summary: The study focuses on the testis-specific genetic system of Drosophila melanogaster and its role in speciation and reproductive isolation. The findings highlight the importance of the Ste-Su(Ste) system and the piRNA pathway in contributing to the reproductive isolation of D. melanogaster lineage from other species.
FRONTIERS IN GENETICS
(2021)
Article
Plant Sciences
Sinzinando Albuquerque-Lima, Ariadna Valentina Lopes, Isabel Cristina Machado
Summary: This study quantified the reproductive isolation between two co-occurring bat-pollinated Bauhinia species and identified the pre- and post-pollination barriers that contribute to their genetic isolation. The results showed that the two species are completely isolated by multiple barriers, including geographic isolation and differences in flowering peaks. This study highlights the importance of reproductive barriers in preventing gene flow and provides insights into the mechanisms of species evolution and reproductive isolation.
JOURNAL OF PLANT RESEARCH
(2023)
Article
Biochemistry & Molecular Biology
Kousuke Toyomura, Taisuke Hisatomi
Summary: Heterothallic haploid strains were isolated from homothallic diploids of Saccharomyces kudriavzevii type strain, demonstrating prezygotic reproductive isolation between Kazachstania naganishii and S. cerevisiae. Postzygotic reproductive isolation was shown to exist among Saccharomyces yeast species, with interspecific F1 hybrids being produced but spore germination being blocked, indicating disorder of chromosome organization in the hybrids.
Article
Ecology
S. Lorena Ament-Velasquez, Aaron A. Vogan, Alexandra Granger-Farbos, Eric Bastiaans, Ivain Martinossi-Allibert, Sven J. Saupe, Suzette de Groot, Martin Lascoux, Alfons J. M. Debets, Corinne Clave, Hanna Johannesson
Summary: Genetic, ecological and simulation data demonstrate that the origin and coexistence of reproductively isolated sympatric groups in a fungus is driven by pleiotropic vegetative incompatibility genes under balancing selection.
NATURE ECOLOGY & EVOLUTION
(2022)
Article
Genetics & Heredity
Tatiana Bikchurina, Fedor N. Golenishchev, Elena A. Kizilova, Ahmad Mahmoudi, Pavel M. Borodin
Summary: The formation of hybrid sterility is a crucial stage in species differentiation. The study on voles of the genus Microtus provides insights into the cytological mechanisms involved. Research indicates that interspecies hybrids exhibit infertility due to chromosome asynapsis, with severity increasing with greater phylogenetic distance between parental species.
FRONTIERS IN GENETICS
(2021)
Article
Biochemistry & Molecular Biology
Daniel J. Bruzzese, Hannes Schuler, Thomas M. Wolfe, Mary M. Glover, Joseph Mastroni, Meredith M. Doellman, Cheyenne Tait, Wee L. Yee, Juan Rull, Martin Aluja, Glen Ray Hood, Robert B. Goughnour, Christian Stauffer, Patrik Nosil, Jeffery L. Feder
Summary: The study found varying degrees of reproductive isolation among allopatric populations of two interbreeding cherry-infesting fruit flies, with one Wolbachia strain associated with unidirectional postmating reproductive isolation. When coupled with other reproductive barriers, the strength of cytoplasmic incompatibility associated with this strain would not prevent its spread to uninfected populations.
Article
Cell Biology
Andrew M. Collins, Corey T. Watson, Felix Breden
Summary: Reproductive isolation and gene divergence contribute to the formation of new species through Dobzhansky-Muller incompatibilities (DMIs). The nature of vertebrate immunoglobulin (IG) genes makes them prone to DMIs. The coordination of evolution between IG genes and the rest of the genome is critical for avoiding autoimmune disease.
IMMUNOLOGY AND CELL BIOLOGY
(2022)
Article
Plant Sciences
Maria Ferriol, Unzue Simo, Carme J. Mansanet, Alejandro Torres, Belen Pico, Antonio J. Monforte, Carlos Romero
Summary: This study investigates the reproductive isolation between different species of Cucumis, including cultivated melon. It identifies several barriers to hybridization, such as pollen tube arrest, fruit set failure, and hybrid male sterility. The study also finds a significant correlation between genetic distance and reproductive isolation stages.
Article
Ecology
Timothy B. Wheeler, Vinton Thompson, William R. Conner, Brandon S. Cooper
Summary: Wolbachia bacteria are common endosymbionts that manipulate host reproduction and can cause cytoplasmic incompatibility. A specific group-B Wolbachia strain (wPig) infecting P. ignipectus was found to have high and variable frequencies among populations and years. It is hypothesized that wPig was acquired horizontally and does not appear to have a significant effect on maintaining the morphological contact zone.
ECOLOGY AND EVOLUTION
(2021)
Article
Agronomy
Takahiro Tezuka, Naoto Kitamura, Masanori Yanase, Toshinobu Morikawa
Summary: Wild tobacco species in the Nicotiana section Suaveolentes are promising genetic resources for disease resistance in cultivated tobacco, but hybrid lethality is observed in crosses between most Suaveolentes species and N. tabacum. Reciprocal crosses between N. benthamiana and N. excelsior show crossing barriers and hybrid sterility, possibly due to meiotic abnormalities causing the sterility. The potential usefulness of reciprocal hybrids between N. benthamiana and N. excelsior is discussed.
Article
Biodiversity Conservation
Oxana Kolomiets, Irina Bakloushinskaya, Mark Pankin, Valentina Tambovtseva, Sergey Matveevsky
Summary: The basic causes of postzygotic isolation can be explained by studying gametogenesis, which is significantly different in males and females. Through analyzing an experimental inbred lineage of the eastern mole vole, it was found that the different translocations between males and females can disrupt spermatogenesis, leading to a decrease in reproductive capacity and speciation.
Review
Veterinary Sciences
Kornsorn Srikulnath, Syed Farhan Ahmad, Thitipong Panthum, Suchinda Malaivijitnond
Summary: Research has shown that macaque bioresources play an indispensable role in advancing scientific discoveries in human physiology, pathology, and other fields, advocating for the establishment of a macaque research center to integrate relevant resources. In addition, detailed genetic studies on macaque bioresources of Thai origin are expected to accelerate the development of vaccines.
JOURNAL OF MEDICAL PRIMATOLOGY
(2022)
Review
Fisheries
Syed Farhan Ahmad, Maryam Jehangir, Kornsorn Srikulnath, Cesar Martins
Summary: The rapid transformation of fish genomics and the availability of high-quality datasets provide important roadmaps for research, highlighting fish genomes as vital resources for genomic studies.
REVIEWS IN FISH BIOLOGY AND FISHERIES
(2022)
Article
Agriculture, Dairy & Animal Science
Watcharaporn Thapana, Nattakan Ariyaraphong, Parinya Wongtienchai, Nararat Laopichienpong, Worapong Singchat, Thitipong Panthum, Syed Farhan Ahmad, Ekaphan Kraichak, Narongrit Muangmai, Prateep Duengkae, Kornsorn Srikulnath
Summary: The evolutionary patterns and phylogenetic utility of duplicate control regions (CRs) in Varanus salvator macromaculatus and other varanids were observed in this study. The results showed an independent evolution of CRs in varanids, with lower divergence between orthologous copies compared to paralogous copies. Recombination events were also found between CRs, and CR2 was identified as a potential phylogenetic marker. These findings contribute to a better understanding of the molecular evolutionary processes in varanid genomes.
Review
Biology
Kornsorn Srikulnath, Syed Farhan Ahmad, Worapong Singchat, Thitipong Panthum
Summary: Transposable elements (TEs) play critical roles in eukaryotic genomes, particularly in sex chromosomes, by mediating genomic novelties and contributing to sex chromosome differentiation. The abundance of TEs in sex-determining regions is linked to the emergence of these regions and is considered a hallmark of chromosome degeneration. Recent approaches have been developed to study the roles and effects of TEs in sex chromosome differentiation and evolution.
Article
Green & Sustainable Science & Technology
Worapong Singchat, Aingorn Chaiyes, Wongsathit Wongloet, Nattakan Ariyaraphong, Kitipong Jaisamut, Thitipong Panthum, Syed Farhan Ahmad, Warut Chaleekarn, Warong Suksavate, Mitree Inpota, Chavin Chaisongkram, Naris Kaewsalubnil, Narongrit Muangmai, Wiyada Chamchumroon, Yoichi Matsuda, Prateep Duengkae, Kornsorn Srikulnath
Summary: This study investigates the genetic diversity and potential distribution areas of red junglefowl in Thailand. It reveals that protected areas are suitable habitats for red junglefowl with high genetic diversity. Understanding red junglefowl can contribute to improved resource management, species reintroduction, and sustainable development, supporting local food security objectives.
Review
Green & Sustainable Science & Technology
Kornsorn Srikulnath, Nattakan Ariyaraphong, Worapong Singchat, Thitipong Panthum, Artem Lisachov, Syed Farhan Ahmad, Kyudong Han, Narongrit Muangmai, Prateep Duengkae
Summary: Mitochondrial displacement loop (mt D-loop) sequence analyses have improved assessments of genetic diversity and population dynamics of endangered species facing climate change and habitat loss. Tracking population haplotypes of these species using mitochondrial-based markers has advanced conservation genomics and biodiversity research. Studies on Asian elephants have used mt D-loop sequences to assess genetic diversity and population-scale hypotheses, shedding light on evolutionary processes and facilitating conservation efforts.
Article
Green & Sustainable Science & Technology
Wongsathit Wongloet, Prach Kongthong, Aingorn Chaiyes, Worapong Singchat, Warong Suksavate, Nattakan Ariyaraphong, Thitipong Panthum, Artem Lisachov, Kitipong Jaisamut, Jumaporn Sonongbua, Trifan Budi, Wannapa Wannakan, Worawit Thienpreecha, Paanwaris Paansri, Syed Farhan Ahmad, Kriangsak Sribuarod, Umphornpimon Prayoon, Pakpoom Aramsirirujiwet, Wiyada Chamchumroon, Narongrit Muangmai, Prateep Duengkae, Kornsorn Srikulnath
Summary: Developing successful conservation programs for genetically depleted species is challenging, as survival and adaptive potential are related to genetic and habitat factors. The greater mouse-deer, a true forest species, has experienced a significant decline in the wild and currently only exists in captive populations. A restoration program has been successful in increasing their population, but maintaining genetic diversity in small captive populations is crucial for long-term recovery.
Article
Agriculture, Dairy & Animal Science
Wongsathit Wongloet, Worapong Singchat, Aingorn Chaiyes, Hina Ali, Surachai Piangporntip, Nattakan Ariyaraphong, Trifan Budi, Worawit Thienpreecha, Wannapa Wannakan, Autchariyapron Mungmee, Kittipong Jaisamut, Thanyapat Thong, Thitipong Panthum, Syed Farhan Ahmad, Artem Lisachov, Warong Suksavate, Narongrit Muangmai, Rattanaphon Chuenka, Mitsuo Nunome, Wiyada Chamchumroon, Kyudong Han, Aniroot Nuangmek, Yoichi Matsuda, Prateep Duengkae, Kornsorn Srikulnath
Summary: This study investigated the socio-cultural, environmental, and genetic aspects of the Mae Hong Son chicken breed in North Thailand. The breed was found to have high levels of genetic diversity and a unique DNA fingerprint. Genetic introgression from red junglefowl and indigenous breeds was identified, supporting the hypothesis of its crossbreeding origin. These findings contribute to our understanding of the genetic blueprint and potential for improving domestic chickens using this breed.
Article
Biology
Nattakan Ariyaraphong, Wongsathit Wongloet, Pish Wattanadilokchatkun, Thitipong Panthum, Worapong Singchat, Thanyapat Thong, Artem Lisachov, Syed Farhan Ahmad, Narongrit Muangmai, Kyudong Han, Prateep Duengkae, Yosapong Temsiripong, Kornsorn Srikulnath
Summary: Morphological divergence between Siamese and other crocodiles has been observed, leading to questions about potential crocodile hybrids. Genetic analysis revealed evidence of introgression between Siamese and saltwater crocodiles, highlighting the importance of identifying hybrids for conservation efforts.
Article
Virology
Akihiko Koga, Syed Farhan Ahmad, Thitipong Panthum, Worapong Singchat, Kornsorn Srikulnath
Summary: Through analyzing the genome of the tammar wallaby, we conclude that walbRep was formed in the red-necked wallaby lineage after its divergence from the tammar wallaby.
Article
Biology
Ryan Rasoarahona, Pish Wattanadilokchatkun, Thitipong Panthum, Thanyapat Thong, Worapong Singchat, Syed Farhan Ahmad, Aingorn Chaiyes, Kyudong Han, Ekaphan Kraichak, Narongrit Muangmai, Akihiko Koga, Prateep Duengkae, Agostinho Antunes, Kornsorn Srikulnath
Summary: The research aims to enhance the ant colony optimization algorithm by integrating marker effectiveness indicators, providing cost-effective solutions for genetic assessments, breeding, and conservation efforts. The study addresses the trade-off between accuracy and cost, and provides valuable insights into real-world genetic studies.
Article
Fisheries
Thitipong Panthum, Pish Wattanadilokchatkun, Kitipong Jaisamut, Worapong Singchat, Syed Farhan Ahmad, Narongrit Muangmai, Prateep Duengkae, Agostinho Antunes, Kornsorn Srikulnath
Summary: In this study, the male-linked region of the jade perch was identified on chromosome 19, and a remnant of the amh gene was found in this region, which is considered a candidate gene for sex determination in teleosts.
Article
Biochemistry & Molecular Biology
Wattanawan Jaito, Thitipong Panthum, Syed Farhan Ahmad, Worapong Singchat, Narongrit Muangmai, Kyudong Han, Akihiko Koga, Prateep Duengkae, Kornsorn Srikulnath
Summary: In this study, sex-specific and linked loci were identified in the Siamese cobra through in silico chromosome mapping. These loci were mainly mapped on the Z sex chromosome, and a putative sex-determining region was found, with one specific locus homologous to the TOPBP1 gene. The findings contribute to our understanding of the genetic basis and sex-specific traits in the Siamese cobra.
Article
Biology
Thitipong Panthum, Nattakan Ariyaraphong, Wongsathit Wongloet, Pish Wattanadilokchatkun, Nararat Laopichienpong, Ryan Rasoarahona, Worapong Singchat, Syed Farhan Ahmad, Ekaphan Kraichak, Narongrit Muangmai, Prateep Duengkae, Yusuke Fukuda, Sam Banks, Yosapong Temsiripong, Tariq Ezaz, Kornsorn Srikulnath
Summary: Hybrids between the Siamese crocodile and saltwater crocodile pose a challenge for conservation efforts. This study used DArT sequencing to identify genome-wide SNPs in both species and confirm hybrid scenarios. PCR-based detection of SNP loci successfully distinguished species and hybridization levels.
Article
Fisheries
Pish Wattanadilokchatkun, Thitipong Panthum, Kitipong Jaisamut, Syed Farhan Ahmad, Sahabhop Dokkaew, Narongrit Muangmai, Prateep Duengkae, Worapong Singchat, Kornsorn Srikulnath
Summary: The study identified and characterized microsatellites in the Siamese fighting fish genome and compared their organization across different species. The identified microsatellites can be used for cross-species amplification, and two microsatellites were successfully validated in different species. The polymorphic markers identified in this study have potential applications in assessing genetic diversity, population structure, and marker-assisted selection.