4.5 Article

Entropy-Enthalpy Compensation in Chemical Reactions and Adsorption: An Exactly Solvable Model

期刊

JOURNAL OF PHYSICAL CHEMISTRY B
卷 115, 期 7, 页码 1689-1692

出版社

AMER CHEMICAL SOC
DOI: 10.1021/jp1105696

关键词

-

资金

  1. NSF [CHE-0749788]
  2. Division Of Chemistry
  3. Direct For Mathematical & Physical Scien [0749788] Funding Source: National Science Foundation

向作者/读者索取更多资源

The free energies of reaction or activation formany systems respond in a common fashion to a perturbing parameter, such as the concentration of an inert additive. Arrhenius plots as a function of the perturbing parameter display a 'compensation temperature at which the free energy appears to be independent of the perturber, an entropy-enthalpy compensation process. Thus, as the perturber's concentration varies, Arrhenius plots of the rate constant or equilibrium constant exhibit a rotation about the fixed compensation temperature. While this (isokinetic/isoequilibrium) component of the phenomenon of entropy-enthalpy compensation appears in a huge number of situations of relevance to chemistry, biology, and materials science, statistical mechanical descriptions have been almost completely lacking. We provide the general statistical mechanical basis for solvent induced isokinetic/isoequilibrium entropy-enthalpy compensation in chemical reactions and adsorption, understanding that can be used to control of rate processes and binding constants in diverse applications. The general behavior is illustrated with an analytical solution for the dilute gas limit.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.5
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Meeting Abstract Biophysics

Molecular Factors Underlying Stress-Triggered Phase-Separation of Pab1

Darren N. Kahan, Ruofan Chen, Joshua Riback, Christopher Katanski, Allan Drummond, Tobin R. Sosnick

BIOPHYSICAL JOURNAL (2019)

Meeting Abstract Biophysics

The Effect of Amyloid Precursor Protein Dimerization on its Conformation and Cleavage

Jacob B. Usadi, Karl Freed, Esmael Haddadian

BIOPHYSICAL JOURNAL (2019)

Meeting Abstract Biophysics

Fast, Atomic-Level AFM and Magnetic Tweezers Simulations of the Unfolding of Membrane Proteins using a New Membrane Burial Potential with H-Bonding

Zongan Wang, John M. Jumper, Karl F. Freed, Tobin R. Sosnick

BIOPHYSICAL JOURNAL (2019)

Meeting Abstract Biophysics

Controlling the Folding and Misfolding of Potassium Channels

Kevin C. Song, Younghoon Koh, Eduardo Perozo, Benoit Roux, Tobin R. Sosnick

BIOPHYSICAL JOURNAL (2019)

Meeting Abstract Biophysics

Structural Dynamics of Potassium Channel Monomer in a Membrane Environment and Tetrameric Assembly

Benoit Roux, Kevin Song, Young Hoon Koh, Eduardo Perozo, Tobin R. Sosnick

BIOPHYSICAL JOURNAL (2019)

Article Multidisciplinary Sciences

Commonly used FRET fluorophores promote collapse of an otherwise disordered protein

Joshua A. Riback, Micayla A. Bowman, Adam M. Zmyslowski, Kevin W. Plaxco, Patricia L. Clark, Tobin R. Sosnick

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Biophysics

On the Interpretation of Force-Induced Unfolding Studies of Membrane Proteins Using Fast Simulations

Zongan Wang, John M. Jumper, Karl F. Freed, Tobin R. Sosnick

BIOPHYSICAL JOURNAL (2019)

Article Chemistry, Physical

Prediction and Validation of a Protein's Free Energy Surface Using Hydrogen Exchange and (Importantly) Its Denaturant Dependence

Xiangda Peng, Michael Baxa, Nabil Faruk, Joseph R. Sachleben, Sebastian Pintscher, Isabelle A. Gagnon, Scott Houliston, Cheryl H. Arrowsmith, Karl F. Freed, Gabriel J. Rocklin, Tobin R. Sosnick

Summary: Combining denaturant dependence of hydrogen-deuterium exchange (HDX) and molecular dynamics (MD) allows for accurate identification of individual hydrogen bonds breaking and mapping the free energy surface (FES) of proteins. The new and extremely fast MD package Upside has been shown to accurately model protein folding compared to all-atom methods. By modifying the energy function using machine-learning, Upside's accuracy has significantly improved in replicating HDX data and protein stability. However, challenges remain in accurately calculating FESs in simulations.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2022)

Article Chemistry, Physical

Challenges and Advantages of Accounting for Backbone Flexibility in Prediction of Protein-Protein Complexes

Nabil F. Faruk, Xiangda Peng, Karl F. Freed, Benoit Roux, Tobin R. Sosnick

Summary: Predicting protein binding is a challenging problem in computational biophysics. While docking algorithms based on rigid protein models can achieve some success, accurately capturing the conformational changes during binding remains difficult. This study investigates the impact of flexibility on predictions of protein-protein complexes using the Upside folding model. The results show that allowing backbone flexibility is generally detrimental to docking performance, but in the case of co-folding of flexible loops, it can improve binding.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2022)

Meeting Abstract Chemistry, Multidisciplinary

New membrane burial potential used in force-induced unfolding simulations of membrane proteins

Zongan Wang, John Jumper, Karl Freed, Tobin Sosnick

ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY (2019)

Meeting Abstract Chemistry, Multidisciplinary

Using SAXS to measure the solvent quality of water for disordered proteins as well as the collapse induced by FRET fluorophores

Joshua Riback, Micayla Bowman, Adam Zmyslowski, Kevin Plaxco, Patricia Clark, Tobin Sosnick

ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY (2019)

Article Chemistry, Multidisciplinary

Helical Contributions Mediate Light-Activated Conformational Change in the LOV2 Domain of Avena sativa Phototropin 1

Josiah P. Zayner, Tilo Mathes, Tobin R. Sosnick, John T. M. Kennis

ACS OMEGA (2019)

Meeting Abstract Biophysics

Saxs Confirms that FRET Dyes Promote Collapse of an Otherwise Fully Disordered Protein

Joshua A. Riback, Micayla A. Bowman, Adam M. Zmyslowski, Kevin W. Plaxco, Patricia L. Clark, Tobin R. Sosnick

BIOPHYSICAL JOURNAL (2018)

暂无数据