4.7 Review

Floristics and plant biogeography in China

期刊

JOURNAL OF INTEGRATIVE PLANT BIOLOGY
卷 50, 期 7, 页码 771-777

出版社

WILEY
DOI: 10.1111/j.1744-7909.2008.00711.x

关键词

biogeography; center of diversification; eastern Asia; floristics; phylogenetics

向作者/读者索取更多资源

In 1998, a revolutionary system of angiosperm classification, the Angiosperm Phylogeny Group system was published. Meanwhile, another new system of classification of angiosperms, the eight-class system was proposed by C. Y. Wu and colleagues based on long term work on the flora of China. The Flora Reipublicae Popularis Sinicae project was initiated in 1959 and completed by 2004. It is the largest Flora so far completed in the world, including 31 228 species of vascular plants, or one-eighth of the global plant diversity. The English-language and updated Flora of China (FOC) is an international joint effort initiated in 1988 and accelerated in 1998. Up to now, 15 of the 24 volumes of the FOC have been published. Based on the floristic data, the composition, characteristics, floristic divisions and affinities of the flora of China have been studied by Wu and colleagues since 1965. In the past 10 years, analyses of the available floristic data have been very productive. The East Asiatic Floristic Kingdom was proposed in 1998. All 346 families of angiosperms in China, according to the eight-class system of classification, were comprehensively discussed by using knowledge of current and historical distribution of seed plants in the world, together with some morphological and molecular data. A scheme of distribution patterns or areal-types of families and genera of seed plants in China was modified and elucidated, together with a proposed scheme of areal-types of the world. Molecular phylogenetic and biogeographical studies of angiosperms in China in the past 10 years also witnessed a progressive development. Integration of morphological and molecular data and fossil evidence revealed some significant results. Eastern Asia, which used to be regarded as an important center of survival during the ice age, is likely an important center of diversification of angiosperms.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.7
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Plant Sciences

Phylotranscriptomic analyses reveal multiple whole-genome duplication events, the history of diversification and adaptations in the Araceae

Lei Zhao, Ying-Ying Yang, Xiao-Jian Qu, Hong Ma, Yi Hu, Hong-Tao Li, Ting-Shuang Yi, De-Zhu Li

Summary: This study improves our understanding of aroid phylogeny by using a large number of nuclear genes. In contrast to the Proto-Araceae group and the lemnoid clade's adaptation to aquatic environments, the results suggest that whole-genome duplication may play a more important role in the evolution of adaptations to tropical, terrestrial environments in the True-Araceae clade.

ANNALS OF BOTANY (2023)

Article Ecology

The diversity of mycorrhiza-associated fungi and trees shapes subtropical mountain forest ecosystem functioning

Ya-Huang Luo, Liang-Liang Ma, Sebastian Seibold, Marc W. W. Cadotte, Kevin S. S. Burgess, Shao-Lin Tan, Lin-Jiang Ye, Wei Zheng, Jia-Yun Zou, Zhi-Fa Chen, De-Tuan Liu, Guang-Fu Zhu, Xiao-Chun Shi, Wei Zhao, De-Zhu Li, Jie Liu, Lian-Ming Gao

Summary: This study assessed the effects of different mycorrhizal types on forest carbon storage and the biodiversity-ecosystem functioning (BEF) relationships in the Gaoligong Mountains, Southwest China. It was found that different mycorrhizal types have significant impacts on forest carbon storage and species diversity. Furthermore, future global changes could potentially alter the mycorrhizal-mediated BEF relationships in mountain forests.

JOURNAL OF BIOGEOGRAPHY (2023)

Review Biochemistry & Molecular Biology

Phylogenomics and the flowering plant tree of life

Cen Guo, Yang Luo, Lian-Ming Gao, Ting-Shuang Yi, Hong-Tao Li, Jun-Bo Yang, De-Zhu Li

Summary: The advancement of next-generation sequencing and long-read sequencing technologies has greatly influenced plant phylogenetic studies. Numerous phylogenetic studies using hundreds to thousands of genes across various clades have emerged in the past decade, bringing plant phylogenetics and evolution into a new era. This review focuses on the application of genomic data in phylogenetic and evolutionary investigations, describes the methodology of experimental and analytical procedures, and summarizes recent progress in flowering plant phylogenomics at different taxonomic levels. Challenges, such as systematic errors and underlying biological factors, are discussed, suggesting that a bifurcating tree may not be the most suitable model for the tree of life. Finally, promising avenues for future plant phylogenomic studies are discussed.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2023)

Article Plant Sciences

Phylogenomic insights into the reticulate evolution of Camellia sect. Paracamellia Sealy (Theaceae)

Sheng-Yuan Qin, Kai Chen, Wen-Ju Zhang, Xiao-Guo Xiang, Zheng-Yu Zuo, Cen Guo, Yao Zhao, Lin-Feng Li, Yu-Guo Wang, Zhi-Ping Song, Ji Yang, Xiao-Qiang Yang, Jian Zhang, Wei-Tao Jin, Qiang Wen, Song-Zi Zhao, Jia-Kuan Chen, De-Zhu Li, Jun Rong

Summary: This study sequenced and assembled the transcriptomes and plastomes of various species in the Camellia genus, providing a comprehensive taxonomic sampling for Camellia sect. Oleifera and C. sect. Paracamellia. Phylogenetic analyses showed that C. sect. Oleifera should be merged with C. sect. Paracamellia. Hybridization was found among polyploid species and their relatives. The divergence of major clades in C. sect. Paracamellia occurred during the middle to late Miocene, and the Quaternary period witnessed rapid diversification likely due to hybridization and polyploidization. This study also suggested that the hexaploid Camellia oleifera may have originated from hybridization between closely related diploid and tetraploid species.

JOURNAL OF SYSTEMATICS AND EVOLUTION (2023)

Review Ecology

The establishment of plants following long-distance dispersal

Zeng-Yuan Wu, Richard I. Milne, Jie Liu, Ran Nathan, Richard T. Corlett, De-Zhu Li

Summary: Long-distance dispersal (LDD) beyond a species' range is crucial for ecological and evolutionary patterns, but postdispersal establishment has not received enough attention. This review summarizes the current understanding of post-LDD establishment in plant colonization, identifies key determinants of establishment success, develops a general framework for quantifying post-LDD establishment, and outlines future research challenges and opportunities. These include improving LDD detection and understanding using novel approaches, investigating mechanistic modeling and inference to understand establishment success, and comparing establishment between past and present. By addressing knowledge gaps, this review aims to enhance our understanding of the impacts of LDD on plant distributions and long-term consequences.

TRENDS IN ECOLOGY & EVOLUTION (2023)

Editorial Material Plant Sciences

Burning lignin: overlooked cues for post-fire seed germination

Dechang Cao, Jerry M. Baskin, Carol C. Baskin, De-Zhu Li

Summary: Smoke cues released from decaying leaves after drying are crucial for seed germination.

TRENDS IN PLANT SCIENCE (2023)

Article Plant Sciences

Variation in gene expression along an elevation gradient of Rhododendron sanguineum var. haemaleum assessed in a comparative transcriptomic analysis

Lin-Jiang Ye, Michael Moller, Ya-Huang Luo, Jia-Yun Zou, Wei Zheng, Jie Liu, De-Zhu Li, Lian-Ming Gao

Summary: Selection along environmental gradients in alpine ecosystems can drive adaptive evolution in plants. However, the genetic variation and adaptation in plants along environmental gradients remain poorly understood. To address this gap, we studied the transcriptomic profiles of Rhododendron sanguineum var. haemaleum at different elevations in the Gaoligong Mountains. We found that gene expression patterns in flower and leaf organs showed parallel shifts but with different functionality, indicating flexibility in response strategies to the heterogeneous environments.

FRONTIERS IN PLANT SCIENCE (2023)

Article Plant Sciences

Plastome evolution in the East Asian lobelias (Lobelioideae) using phylogenomic and comparative analyses

Chun-Jiao Li, Xin-Tong Xie, Hong-Xin Liu, Ruo-Nan Wang, De-Zhu Li

Summary: This study sequenced and assembled the plastomes of East Asian lobelias, revealing variations in plastome gene structure among different taxonomic sections. The study also assessed the variability of several genes and simple sequence repeats, which can be used as important research tools in DNA barcoding and species delineation. The study further identified key genes related to the evolutionary history and adaptive evolution of East Asian lobelias. These findings will contribute to further advancements in taxonomy, evolutionary biology, and the utilization of medicinal plant resources.

FRONTIERS IN PLANT SCIENCE (2023)

Article Plant Sciences

Dynamics of imprinted genes and their epigenetic mechanisms in castor bean seed with persistent endosperm

Bing Han, Yelan Li, Di Wu, De-Zhu Li, Aizhong Liu, Wei Xu

Summary: Genomic imprinting plays a significant role in the endosperm development, storage compound accumulation, and seed germination in castor bean. The study reveals that DNA methylation has a limited role in controlling genomic imprinting, while histone modifications play a more significant role in regulating the expression of most imprinted genes.

NEW PHYTOLOGIST (2023)

Article Plant Sciences

A comparative full-length transcriptomic resource provides insight into the perennial monocarpic mass flowering

Jiu-Xia Zhao, Shu Wang, Jiazhi Liu, Xiao-Dong Jiang, Jing Wen, Zhi-Quan Suo, Jie Liu, Mi-Cai Zhong, Qin Wang, Zhirong Gu, Changning Liu, Yunfei Deng, Jin-Yong Hu, De-Zhu Li

Summary: This study generated a transcriptome resource for two Strobilanthes species, providing valuable information for understanding the molecular mechanisms of perennial monocarpic mass flowering. The differential expression of transcription factors potentially involved in the photoperiod and circadian-clock pathway suggests their role in regulating flowering time diversity.

PLANT JOURNAL (2023)

Article Plant Sciences

Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia

Shi-Yu Lv, Xia-Ying Ye, Zhong-Hu Li, Peng-Fei Ma, De-Zhu Li

Summary: Fargesia, the largest genus in the temperate bamboo tribe Arundinarieae, is mainly found in the mountains of Southwest China with over 90 species. These bamboos are essential for subalpine forest ecosystems and provide food and habitat for endangered animals like the giant panda. However, identifying Fargesia species is challenging due to rapid radiation and slow molecular evolutionary rate. In this study, the discriminatory power of complete plastomes and nrDNA sequences were evaluated and found to be more effective than standard barcodes. Despite this, additional nuclear markers are needed for accurate species discrimination.

PLANT DIVERSITY (2023)

Article Plant Sciences

The identity of Dinochloa species and enumeration of Melocalamus (Poaceae: Bambusoideae) in China

Jing-Xia Liu, Zu-Chang Xu, Yu-Xiao Zhang, Meng-Yuan Zhou, De-Zhu Li

Summary: Three woody bamboo species collected in Hainan, China in 1940, previously described as Dinochloa, are found to be closely related to Melocalamus through molecular phylogenetic analysis and morphological comparison. Therefore, it is suggested to transfer these three species to the genus Melocalamus.

PLANT DIVERSITY (2023)

Article Plant Sciences

New insights into intergeneric relationships of Hickeliinae (Poaceae: Bambusoideae) revealed by complete plastid genomes

Rivontsoa A. Rakotonasolo, Soejatmi Dransfield, Thomas Haevermans, Helene Ralimanana, Maria S. Vorontsova, Meng-Yuan Zhou, De-Zhu Li

Summary: The Hickeliinae is an important subtribe of tropical bamboos, mainly found in Madagascar, Comoros, Reunion Island, and a small part of Tanzania. Molecular phylogenetic analysis of newly sequenced plastid genomes revealed conserved structures and provided informative data for phylogenetic reconstructions. The analysis showed that all genera of Hickeliinae are monophyletic, except for Nastus, which forms two distant clades. This study provides significant resources for further genetic and phylogenomic research on this under-studied subtribe.

PLANT DIVERSITY (2023)

Article Plant Sciences

Five new and noteworthy species of Epidendroideae (Orchidaceae) from southwestern China based on morphological and phylogenetic evidence

Ji-Dong Ya, Wan -Ting Wang, Yun-Long Liu, Hong Jiang, Zhou-Dong Han, Ting Zhang, Hua Huang, Jie Cai, De-Zhu Li

Summary: Five new orchid species from Yunnan Province and Tibet have been described and illustrated. The study sequenced the complete plastomes of these species and their related species to confirm their identities and determine their phylogenetic relationships. The results showed that the N. lihengiae species is closely related to the N. grandiflora and N. pinetorum clade, while N. chawalongensis is sister to N. alternifolia. Additionally, the relationships among species in the genus Gastrochilus were inconsistent, but the two new species, G. lihengiae and G. bernhardtianus, were supported by all datasets.

PHYTOKEYS (2023)

Article Biochemistry & Molecular Biology

Multiple paternally inherited chloroplast capture events associated with Taxus speciation in the Hengduan Mountains

Han-Tao Qin, Michael Moller, Richard Milne, Ya-Huang Luo, Guang-Fu Zhu, De-Zhu Li, Jie Liu, Lian-Ming Gao

Summary: Mountainous regions provide diverse habitats for speciation. In the Hengduan Mountains of southwest China, four Taxus lineages were studied. Conflicting phylogenetic relationships were found between nuclear and chloroplast sequences. Limited gene flow was observed between species. Based on the data, it was determined that two Taxus species originated through hybridization and chloroplast capture events.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2023)

暂无数据