Two novel NAC transcription factors regulate gene expression and flowering time by associating with the histone demethylase JMJ14

Efficient genome editing in plants using a CRISPR/Cas system

(2013) Zhengyan Feng et al.   CELL RESEARCH

DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors

(2012) Ditte H. Welner et al.   BIOCHEMICAL JOURNAL

Control of Seed Germination by Light-Induced Histone Arginine Demethylation Activity

(2012) Jung-Nam Cho et al.   DEVELOPMENTAL CELL

Mutations in the Arabidopsis H3K4me2/3 Demethylase JMJ14 Suppress Posttranscriptional Gene Silencing by Decreasing Transgene Transcription

(2012) I. Le Masson et al.   PLANT CELL

Overexpression of a histone H3K4 demethylase, JMJ15, accelerates flowering time in Arabidopsis

(2012) Hongchun Yang et al.   PLANT CELL REPORTS

NAC proteins: regulation and role in stress tolerance

(2012) Swati Puranik et al.   TRENDS IN PLANT SCIENCE

IDN2 and Its Paralogs Form a Complex Required for RNA–Directed DNA Methylation

(2012) Cui-Jun Zhang et al.   PLoS Genetics

A Companion Cell–Dominant and Developmentally Regulated H3K4 Demethylase Controls Flowering Time in Arabidopsis via the Repression of FLC Expression

(2012) Hongchun Yang et al.   PLoS Genetics

Epigenetic gene regulation by plant Jumonji group of histone demethylase

(2011) Xiangsong Chen et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

NAC transcription factors in plant abiotic stress responses

(2011) Kazuo Nakashima et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

(2011) François Roudier et al.   EMBO JOURNAL

Histone Lysine Demethylase JARID1a Activates CLOCK-BMAL1 and Influences the Circadian Clock

(2011) L. DiTacchio et al.   SCIENCE

Evidence for Network Evolution in an Arabidopsis Interactome Map

(2011) et al.   SCIENCE

A structural view of the conserved domain of rice stress-responsive NAC1

(2011) Qingfeng Chen et al.   Protein & Cell

JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis

(2010) Falong Lu et al.   CELL RESEARCH

Autocatalytic differentiation of epigenetic modifications within the Arabidopsis genome

(2010) Soichi Inagaki et al.   EMBO JOURNAL

Growth habit determination by the balance of histone methylation activities in Arabidopsis

(2010) Jong-Hyun Ko et al.   EMBO JOURNAL

Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation

(2010) Angelique Deleris et al.   EMBO REPORTS

JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis

(2010) I. R. Searle et al.   GENES & DEVELOPMENT

Global Analysis of Direct Targets of Secondary Wall NAC Master Switches in Arabidopsis

(2010) Ruiqin Zhong et al.   Molecular Plant

VND-INTERACTING2, a NAC Domain Transcription Factor, Negatively Regulates Xylem Vessel Formation inArabidopsis

(2010) Masatoshi Yamaguchi et al.   PLANT CELL

A plant-specific histone H3 lysine 4 demethylase represses the floral transition in Arabidopsis

(2010) Wannian Yang et al.   PLANT JOURNAL

The Jumonji C Domain-Containing Protein JMJ30 Regulates Period Length in the Arabidopsis Circadian Clock

(2010) S. X. Lu et al.   PLANT PHYSIOLOGY

Plant NAC-type transcription factor proteins contain a NARD domain for repression of transcriptional activation

(2010) Yu-Jun Hao et al.   PLANTA

Jumonji domain protein JMJD5 functions in both the plant and human circadian systems

(2010) M. A. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Histone demethylases in development and disease

(2010) Marianne Terndrup Pedersen et al.   TRENDS IN CELL BIOLOGY

TheArabidopsis thalianaNAC transcription factor family: structure–function relationships and determinants of ANAC019 stress signalling

(2009) Michael K. Jensen et al.   BIOCHEMICAL JOURNAL

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites

(2009) Asuka Miura et al.   EMBO JOURNAL

ARABIDOPSIS TRITHORAX-RELATED7 Is Required for Methylation of Lysine 4 of Histone H3 and for Transcriptional Activation of FLOWERING LOCUS C

(2009) Y. Tamada et al.   PLANT CELL

Repression of FLOWERING LOCUS T Chromatin by Functionally Redundant Histone H3 Lysine 4 Demethylases in Arabidopsis

(2009) Ju-Hee Jeong et al.   PLoS One

Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

(2009) Xiaoyu Zhang et al.   GENOME BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

A Novel NAC Transcription Factor, IDEF2, That Recognizes the Iron Deficiency-responsive Element 2 Regulates the Genes Involved in Iron Homeostasis in Plants

(2008) Yuko Ogo et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comparative Analysis of JmjC Domain-containing Proteins Reveals the Potential Histone Demethylases inArabidopsisand Rice

(2008) Falong Lu et al.   Journal of Integrative Plant Biology

ARABIDOPSIS TRITHORAX1 Dynamically Regulates FLOWERING LOCUS C Activation via Histone 3 Lysine 4 Trimethylation

(2008) S. Pien et al.   PLANT CELL

Control of Genic DNA Methylation by a jmjC Domain-Containing Protein in Arabidopsis thaliana

(2008) H. Saze et al.   SCIENCE

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY