Effects of Hfq on the conformation and compaction of DNA

A Nanochannel Platform for Single DNA Studies: From Crowding, Protein DNA Interaction, to Sequencing of Genomic Information

(2014) Johan R. C. van der Maarel et al.   ISRAEL JOURNAL OF CHEMISTRY

Hfq protein deficiency in Escherichia coli affects ColE1-like but not λ plasmid DNA replication

(2014) Grzegorz M. Cech et al.   PLASMID

Recognition of the small regulatory RNA RydC by the bacterial Hfq protein

(2014) Daniela Dimastrogiovanni et al.   eLife

Tn5 transposition in Escherichia coli is repressed by Hfq and activated by over-expression of the small non-coding RNA SgrS

(2014) Joseph A Ross et al.   Mobile DNA

TheEscherichia coliRNA processing and degradation machinery is compartmentalized within an organized cellular network

(2013) Aziz Taghbalout et al.   BIOCHEMICAL JOURNAL

A nanofluidic device for single molecule studies with in situ control of environmental solution conditions

(2013) Ce Zhang et al.   LAB ON A CHIP

Mapping Hfq-RNA interaction surfaces using tryptophan fluorescence quenching

(2013) Kirsten E. Robinson et al.   NUCLEIC ACIDS RESEARCH

Atomic Force Microscopy Analysis of the Role of Major DNA-Binding Proteins in Organization of the Nucleoid in Escherichia coli

(2013) Ryosuke L. Ohniwa et al.   PLoS One

Archaeal and eukaryotic homologs of Hfq

(2013) Cameron Mura et al.   RNA Biology

Cycling of RNAs on Hfq

(2013) E. Gerhart H. Wagner   RNA Biology

Lsm proteins and Hfq

(2013) Carol J. Wilusz et al.   RNA Biology

Effect of H-NS on the elongation and compaction of single DNA molecules in a nanospace

(2013) Ce Zhang et al.   Soft Matter

High throughput fabrication of disposable nanofluidic lab-on-chip devices for single molecule studies

(2012) Jeroen A. van Kan et al.   Biomicrofluidics

Nanouidic Compaction of DNA by Like-Charged Protein

(2012) Ce Zhang et al.   JOURNAL OF PHYSICAL CHEMISTRY B

The low-resolution solution structure of Vibrio cholerae Hfq in complex with Qrr1 sRNA

(2012) Helen A. Vincent et al.   NUCLEIC ACIDS RESEARCH

Requirement of upstream Hfq-binding (ARN)x elements in glmS and the Hfq C-terminal region for GlmS upregulation by sRNAs GlmZ and GlmY†

(2012) Nilshad N. Salim et al.   NUCLEIC ACIDS RESEARCH

Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition

(2012) E. Sauer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA confinement in nanochannels: physics and biological applications

(2012) Walter Reisner et al.   REPORTS ON PROGRESS IN PHYSICS

The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rho-dependent terminators

(2011) Makhlouf Rabhi et al.   EMBO JOURNAL

Proton beam writing a platform technology for high quality three-dimensional metal mold fabrication for nanofluidic applications

(2011) J. A. van Kan et al.   MICROSYSTEM TECHNOLOGIES-MICRO-AND NANOSYSTEMS-INFORMATION STORAGE AND PROCESSING SYSTEMS

Regulation by Small RNAs in Bacteria: Expanding Frontiers

(2011) Gisela Storz et al.   MOLECULAR CELL

Effect of Nanochannel Geometry on DNA Structure in the Presence of Macromolecular Crowding Agent

(2011) Jeremy J. Jones et al.   NANO LETTERS

Hfq and its constellation of RNA

(2011) Jörg Vogel et al.   NATURE REVIEWS MICROBIOLOGY

Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq

(2011) Mads Beich-Frandsen et al.   NUCLEIC ACIDS RESEARCH

E. coli DNA associated with isolated Hfq interacts with Hfq's distal surface and C-terminal domain

(2010) Taylor B. Updegrove et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Hfq affects mRNA levels independently of degradation

(2010) Jacques Le Derout et al.   BMC MOLECULAR BIOLOGY

DNA manipulation, sorting, and mapping in nanofluidic systems

(2010) Stephen L. Levy et al.   CHEMICAL SOCIETY REVIEWS

C-Terminally Truncated Derivatives of Escherichia coli Hfq Are Proficient in Riboregulation

(2010) Anders Steno Olsen et al.   JOURNAL OF MOLECULAR BIOLOGY

Tn10/IS10 transposition is downregulated at the level of transposase expression by the RNA-binding protein Hfq

(2010) Joseph A. Ross et al.   MOLECULAR MICROBIOLOGY

Conformational transition of DNA bound to Hfq probed by infrared spectroscopy

(2010) Frédéric Geinguenaud et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Cellular Electron Microscopy Imaging Reveals the Localization of the Hfq Protein Close to the Bacterial Membrane

(2009) Elia Diestra et al.   PLoS One

Macromolecular crowding induced elongation and compaction of single DNA molecules confined in a nanochannel

(2009) C. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of Escherichia coli Hfq bound to polyriboadenylate RNA

(2009) T. M. Link et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of electrostatic screening on the conformation of single DNA molecules confined in a nanochannel

(2008) Ce Zhang et al.   JOURNAL OF CHEMICAL PHYSICS

Molecular Dynamics Simulation of Multivalent-Ion Mediated Attraction between DNA Molecules

(2008) Liang Dai et al.   PHYSICAL REVIEW LETTERS