The ATP binding site of the chromatin remodeling homolog Lsh is required for nucleosome density and de novo DNA methylation at repeat sequences

Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Diverse Eukaryotes

(2014) Jason T. Huff et al.   CELL

The Mi-2 Homolog Mit1 Actively Positions Nucleosomes within Heterochromatin To Suppress Transcription

(2014) K. M. Creamer et al.   MOLECULAR AND CELLULAR BIOLOGY

CG hypomethylation in Lsh-/- mouse embryonic fibroblasts is associated with de novo H3K4me1 formation and altered cellular plasticity

(2014) W. Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Training-free atomistic prediction of nucleosome occupancy

(2014) P. Minary et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms and Functions of ATP-Dependent Chromatin-Remodeling Enzymes

(2013) Geeta J. Narlikar et al.   CELL

CG methylated microarrays identify a novel methylated sequence bound by the CEBPB ATF4 heterodimer that is active in vivo

(2013) I. K. Mann et al.   GENOME RESEARCH

Nucleosome sliding mechanisms: new twists in a looped history

(2013) Felix Mueller-Planitz et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Effects of DNA methylation on nucleosome stability

(2013) Clayton K. Collings et al.   NUCLEIC ACIDS RESEARCH

DNA methylation determines nucleosome occupancy in the 5′-CpG islands of tumor suppressor genes

(2013) A Portela et al.   ONCOGENE

DNA methylation and differentiation: silencing, upregulation and modulation of gene expression

(2013) Melanie Ehrlich et al.   Epigenomics

DNA Methylation Regulated Nucleosome Dynamics

(2013) Isabel Jimenez-Useche et al.   Scientific Reports

Understanding the Connection between Epigenetic DNA Methylation and Nucleosome Positioning from Computer Simulations

(2013) Guillem Portella et al.   PLoS Computational Biology

Lsh regulates LTR retrotransposon repression independently of Dnmt3b function

(2013) Donncha S Dunican et al.   GENOME BIOLOGY

Impact of Methylation on the Physical Properties of DNA

(2012) Alberto Pérez et al.   BIOPHYSICAL JOURNAL

Swi2/Snf2 remodelers: hybrid views on hybrid molecular machines

(2012) Karl-Peter Hopfner et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules

(2012) T. K. Kelly et al.   GENOME RESEARCH

A unique regulatory phase of DNA methylation in the early mammalian embryo

(2012) Zachary D. Smith et al.   NATURE

Methyltransferases prefer monomer over core-trimmed nucleosomes as in vitro substrates

(2011) Yong Jiang et al.   ANALYTICAL BIOCHEMISTRY

Polycomb-Repressed Genes Have Permissive Enhancers that Initiate Reprogramming

(2011) Phillippa C. Taberlay et al.   CELL

ATP-dependent chromatin remodeling: genetics, genomics and mechanisms

(2011) Diana C Hargreaves et al.   CELL RESEARCH

Pioneer transcription factors: establishing competence for gene expression

(2011) K. S. Zaret et al.   GENES & DEVELOPMENT

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

(2011) Ryan Lister et al.   NATURE

Nucleosomes protect DNA from DNA methylation in vivo and in vitro

(2011) Max Felle et al.   NUCLEIC ACIDS RESEARCH

Lsh, chromatin remodeling family member, modulates genome-wide cytosine methylation patterns at nonrepeat sequences

(2011) Y. Tao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nucleosomes Containing Methylated DNA Stabilize DNA Methyltransferases 3A/3B and Ensure Faithful Epigenetic Inheritance

(2011) Shikhar Sharma et al.   PLoS Genetics

Structure and Function of Mammalian DNA Methyltransferases

(2010) Renata Zofia Jurkowska et al.   CHEMBIOCHEM

DNA hypomethylation caused by Lsh deletion promotes erythroleukemia development

(2010) Tao Fan et al.   Epigenetics

Combinatorial, site-specific requirement for heterochromatic silencing factors in the elimination of nucleosome-free regions

(2010) J. F. Garcia et al.   GENES & DEVELOPMENT

LSH and G9a/GLP complex are required for developmentally programmed DNA methylation

(2010) K. Myant et al.   GENOME RESEARCH

H2A.Z Maintenance during Mitosis Reveals Nucleosome Shifting on Mitotically Silenced Genes

(2010) Theresa K. Kelly et al.   MOLECULAR CELL

Chromatin remodelling during development

(2010) Lena Ho et al.   NATURE

Relationship between nucleosome positioning and DNA methylation

(2010) Ramakrishna K. Chodavarapu et al.   NATURE

Stk40 links the pluripotency factor Oct4 to the Erk/MAPK pathway and controls extraembryonic endoderm differentiation

(2010) L. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chromatin Higher-order Structure and Dynamics

(2010) C. L. Woodcock et al.   Cold Spring Harbor Perspectives in Biology

The Biology of Chromatin Remodeling Complexes

(2009) Cedric R. Clapier et al.   Annual Review of Biochemistry

Selective Anchoring of DNA Methyltransferases 3A and 3B to Nucleosomes Containing Methylated DNA

(2009) S. Jeong et al.   MOLECULAR AND CELLULAR BIOLOGY

Human DNA methylomes at base resolution show widespread epigenomic differences

(2009) Ryan Lister et al.   NATURE

Lsh Participates in DNA Methylation and Silencing of Stem Cell Genes

(2009) Sichuan Xi et al.   STEM CELLS

The chromatin remodelers ISWI and ACF1 directly repress Wingless transcriptional targets

(2008) Yan I. Liu et al.   DEVELOPMENTAL BIOLOGY

The ground state of embryonic stem cell self-renewal

(2008) Qi-Long Ying et al.   NATURE

The DNA-encoded nucleosome organization of a eukaryotic genome

(2008) Noam Kaplan et al.   NATURE