标题
STOCK: Structure mapper and online coarse-graining kit for molecular simulations
作者
关键词
-
出版物
JOURNAL OF COMPUTATIONAL CHEMISTRY
Volume 36, Issue 7, Pages 467-477
出版商
Wiley
发表日期
2014-12-15
DOI
10.1002/jcc.23806
参考文献
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- Coarse-Grained (Multiscale) Simulations in Studies of Biophysical and Chemical Systems
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- (2011) Andrzej J. Rzepiela et al. PHYSICAL CHEMISTRY CHEMICAL PHYSICS
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