标题
Inference of Isoforms from Short Sequence Reads
作者
关键词
-
出版物
JOURNAL OF COMPUTATIONAL BIOLOGY
Volume 18, Issue 3, Pages 305-321
出版商
Mary Ann Liebert Inc
发表日期
2011-03-11
DOI
10.1089/cmb.2010.0243
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Statistical inferences for isoform expression in RNA-Seq
- (2009) Hui Jiang et al. BIOINFORMATICS
- RNA-MATE: a recursive mapping strategy for high-throughput RNA-sequencing data
- (2009) Nicole Cloonan et al. BIOINFORMATICS
- Probabilistic resolution of multi-mapping reads in massively parallel sequencing data using MuMRescueLite
- (2009) T. Hashimoto et al. BIOINFORMATICS
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses
- (2009) M. J. Fullwood et al. GENOME RESEARCH
- Detecting Alternative Gene Structures from Spliced ESTs: A Computational Approach
- (2009) Paola Bonizzoni et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Personalized copy number and segmental duplication maps using next-generation sequencing
- (2009) Can Alkan et al. NATURE GENETICS
- Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing
- (2009) M. Yassour et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- PEMer: a computational framework with simulation-based error models for inferring genomic structural variants from massive paired-end sequencing data
- (2009) Jan O Korbel et al. GENOME BIOLOGY
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- SOAP: short oligonucleotide alignment program
- (2008) R. Li et al. BIOINFORMATICS
- RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
- (2008) J. C. Marioni et al. GENOME RESEARCH
- Mapping short DNA sequencing reads and calling variants using mapping quality scores
- (2008) H. Li et al. GENOME RESEARCH
- Power sequencing
- (2008) Brenton R. Graveley NATURE
- Alternative isoform regulation in human tissue transcriptomes
- (2008) Eric T. Wang et al. NATURE
- Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
- (2008) Brian T. Wilhelm et al. NATURE
- Genome-wide analysis of transcript isoform variation in humans
- (2008) Tony Kwan et al. NATURE GENETICS
- Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
- (2008) Qun Pan et al. NATURE GENETICS
- Efficient targeted transcript discovery via array-based normalization of RACE libraries
- (2008) Sarah Djebali et al. NATURE METHODS
- Isoform discovery by targeted cloning, 'deep-well' pooling and parallel sequencing
- (2008) Kourosh Salehi-Ashtiani et al. NATURE METHODS
- Stem cell transcriptome profiling via massive-scale mRNA sequencing
- (2008) Nicole Cloonan et al. NATURE METHODS
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
- MetaSim—A Sequencing Simulator for Genomics and Metagenomics
- (2008) Daniel C. Richter et al. PLoS One
- Variation in the Large-Scale Organization of Gene Expression Levels in the Hippocampus Relates to Stable Epigenetic Variability in Behavior
- (2008) Mark D. Alter et al. PLoS One
- The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
- (2008) U. Nagalakshmi et al. SCIENCE
- A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
- (2008) M. Sultan et al. SCIENCE
- A General Definition and Nomenclature for Alternative Splicing Events
- (2008) Michael Sammeth et al. PLoS Computational Biology
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started