Bacterial Community Reconstruction Using Compressed Sensing

Predicting a Human Gut Microbiota's Response to Diet in Gnotobiotic Mice

(2011) J. J. Faith et al.   SCIENCE

Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans

(2011) B. D. Muegge et al.   SCIENCE

Compressed Genotyping

(2010) Yaniv Erlich et al.   IEEE TRANSACTIONS ON INFORMATION THEORY

Coherence-Based Performance Guarantees for Estimating a Sparse Vector Under Random Noise

(2010) Zvika Ben-Haim et al.   IEEE TRANSACTIONS ON SIGNAL PROCESSING

Identification of rare alleles and their carriers using compressed se(que)nsing

(2010) N. Shental et al.   NUCLEIC ACIDS RESEARCH

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

(2009) M. Hamady et al.   GENOME RESEARCH

Use of pyrosequencing and DNA barcodes to monitor variations in Firmicutes and Bacteroidetes communities in the gut microbiota of obese humans

(2008) Fabrice Armougom et al.   BMC GENOMICS

Compressed Sensing in Astronomy

(2008) JÉrÔme Bobin et al.   IEEE Journal of Selected Topics in Signal Processing

Single-pixel imaging via compressive sampling

(2008) Marco F. Duarte et al.   IEEE SIGNAL PROCESSING MAGAZINE

Analysis of Mixed Sequencing Chromatograms and Its Application in Direct 16S rRNA Gene Sequencing of Polymicrobial Samples

(2008) O. Kommedal et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

(2008) Micah Hamady et al.   NATURE METHODS

Microbiology in the post-genomic era

(2008) Duccio Medini et al.   NATURE REVIEWS MICROBIOLOGY

The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains

(2008) Pablo Yarza et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing

(2008) Les Dethlefsen et al.   PLOS BIOLOGY

Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing

(2008) Susan M. Huse et al.   PLoS Genetics