Combining modelling and experimental approaches to explain how calcium signatures are decoded by calmodulin-binding transcription activators (CAMTAs) to produce specific gene expression responses

Kinetic models in industrial biotechnology – Improving cell factory performance

(2014) Joachim Almquist et al.   METABOLIC ENGINEERING

Regulation of plant immunity through ubiquitin-mediated modulation of Ca2+-calmodulin-AtSR1/CAMTA3 signaling

(2014) Lei Zhang et al.   PLANT JOURNAL

A key general stress response motif is regulated non-uniformly by CAMTA transcription factors

(2014) Geoffrey Benn et al.   PLANT JOURNAL

CAMTA 1 regulates drought responses in Arabidopsis thaliana

(2013) Neha Pandey et al.   BMC GENOMICS

Calcium/Calmodulin-Dependent Protein Kinase Is Negatively and Positively Regulated by Calcium, Providing a Mechanism for Decoding Calcium Responses during Symbiosis Signaling

(2013) J. B. Miller et al.   PLANT CELL

Roles of CAMTA transcription factors and salicylic acid in configuring the low-temperature transcriptome and freezing tolerance of Arabidopsis

(2013) YongSig Kim et al.   PLANT JOURNAL

Recent Advances in Calcium/Calmodulin-Mediated Signaling with an Emphasis on Plant-Microbe Interactions

(2013) B. W. Poovaiah et al.   PLANT PHYSIOLOGY

Modelling and experimental analysis of the role of interacting cytosolic and vacuolar pools in shaping low temperature calcium signatures in plant cells

(2012) Junli Liu et al.   Molecular BioSystems

Calcium signatures are decoded by plants to give specific gene responses

(2012) Helen J. Whalley et al.   NEW PHYTOLOGIST

Low-temperature perception leading to gene expression and cold tolerance in higher plants

(2012) Marc R. Knight et al.   NEW PHYTOLOGIST

A stress-specific calcium signature regulating an ozone-responsive gene expression network in Arabidopsis

(2012) Eleri F. Short et al.   PLANT JOURNAL

Buffering Capacity Explains Signal Variation in Symbiotic Calcium Oscillations

(2012) E. Granqvist et al.   PLANT PHYSIOLOGY

Automated Bayesian model development for frequency detection in biological time series

(2011) Emma Granqvist et al.   BMC Systems Biology

Transcriptomic Analysis Reveals Calcium Regulation of Specific Promoter Motifs inArabidopsis

(2011) Helen J. Whalley et al.   PLANT CELL

Coping with Stresses: Roles of Calcium- and Calcium/Calmodulin-Regulated Gene Expression

(2011) Anireddy S.N. Reddy et al.   PLANT CELL

The Language of Calcium Signaling

(2010) Antony N. Dodd et al.   Annual Review of Plant Biology

Modelling dynamic plant cells

(2010) Junli Liu et al.   CURRENT OPINION IN PLANT BIOLOGY

Calcium-Regulated Transcription in Plants

(2010) Yael Galon et al.   Molecular Plant

Calcium Signals: The Lead Currency of Plant Information Processing

(2010) J. Kudla et al.   PLANT CELL

Intermolecular tuning of calmodulin by target peptides and proteins: Differential effects on Ca2+ binding and implications for kinase activation

(2010) Olve B. Peersen et al.   PROTEIN SCIENCE

Calcium Oscillations

(2010) G. Dupont et al.   Cold Spring Harbor Perspectives in Biology

A Dynamic Model of Interactions of Ca2+, Calmodulin, and Catalytic Subunits of Ca2+/Calmodulin-Dependent Protein Kinase II

(2010) Shirley Pepke et al.   PLoS Computational Biology

A Mathematical Model of Action Potential in Cells of Vascular Plants

(2009) Vladimir Sukhov et al.   JOURNAL OF MEMBRANE BIOLOGY

Calcium and Calmodulin-Mediated Regulation of Gene Expression in Plants

(2009) Min Chul Kim et al.   Molecular Plant

Roles for Arabidopsis CAMTA Transcription Factors in Cold-Regulated Gene Expression and Freezing Tolerance

(2009) C. J. Doherty et al.   PLANT CELL

Information transfer in signaling pathways: A study using coupled simulated and experimental data

(2008) Jürgen Pahle et al.   BMC BIOINFORMATICS

Elucidating the mechanisms of cooperative calcium-calmodulin interactions: a structural systems biology approach

(2008) Najl V Valeyev et al.   BMC Systems Biology

Calmodulin-binding transcription activator (CAMTA) 3 mediates biotic defense responses in Arabidopsis

(2008) Yael Galon et al.   FEBS LETTERS

Shaping the calcium signature

(2008) Martin R. McAinsh et al.   NEW PHYTOLOGIST