4.6 Article

Motor properties from persistence: a linear molecular walker lacking spatial and temporal asymmetry

期刊

NEW JOURNAL OF PHYSICS
卷 17, 期 -, 页码 -

出版社

IOP PUBLISHING LTD
DOI: 10.1088/1367-2630/17/5/055017

关键词

molecular motor; Brownian ratchet; kinesin; Langevin dynamics; artificial protein motor; feedback control

资金

  1. Human Frontier Science Program [RGP0031/2007]
  2. NSERC
  3. Swedish Research Council
  4. University of New South Wales
  5. EU [308850]

向作者/读者索取更多资源

The stepping direction of linear molecular motors is usually defined by a spatial asymmetry of the motor, its track, or both. Here we present a model for a molecular walker that undergoes biased directional motion along a symmetric track in the presence of a temporally symmetric chemical cycle. Instead of using asymmetry, directionality is achieved by persistence. At small load force the walker can take on average thousands of steps in a given direction until it stochastically reverses direction. We discuss a specific experimental implementation of a synthetic motor based on this design and find, using Langevin and Monte Carlo simulations, that a realistic walker can work against load forces on the order of picoNewtons with an efficiency of similar to 18%, comparable to that of kinesin. In principle, the walker can be turned into a permanent motor by externally monitoring the walker's momentary direction of motion, and using feedback to adjust the direction of a load force. We calculate the thermodynamic cost of using feedback to enhance motor performance in terms of the Shannon entropy, and find that it reduces the efficiency of a realistic motor only marginally. We discuss the implications for natural protein motor performance in the context of the strong performance of this design based only on a thermal ratchet.

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