Efficient Depletion of Host DNA Contamination in Malaria Clinical Sequencing

Whole genome sequencing analysis of Plasmodium vivax using whole genome capture

(2012) A Bright et al.   BMC GENOMICS

Optimizing illumina next-generation sequencing library preparation for extremely at-biased genomes

(2012) Samuel O Oyola et al.   BMC GENOMICS

Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study

(2012) Simon R Harris et al.   LANCET INFECTIOUS DISEASES

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

(2012) Magnus Manske et al.   NATURE

Rapid Whole-Genome Sequencing for Investigation of a Neonatal MRSA Outbreak

(2012) Claudio U. Köser et al.   NEW ENGLAND JOURNAL OF MEDICINE

Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease

(2012) John R. Horton et al.   NUCLEIC ACIDS RESEARCH

Optimal enzymes for amplifying sequencing libraries

(2011) Michael A Quail et al.   NATURE METHODS

Real-time sequencing

(2011) Thomas D. Otto   NATURE REVIEWS MICROBIOLOGY

Identification of a Salmonellosis Outbreak by Means of Molecular Sequencing

(2011) E. Kurt Lienau et al.   NEW ENGLAND JOURNAL OF MEDICINE

Whole-Genome Sequencing and Social-Network Analysis of a Tuberculosis Outbreak

(2011) Jennifer L. Gardy et al.   NEW ENGLAND JOURNAL OF MEDICINE

An Effective Method to Purify Plasmodium falciparum DNA Directly from Clinical Blood Samples for Whole Genome High-Throughput Sequencing

(2011) Sarah Auburn et al.   PLoS One

The MspJI family of modification-dependent restriction endonucleases for epigenetic studies

(2011) D. Cohen-Karni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Are diagnostic and public health bacteriology ready to become branches of genomic medicine?

(2011) Mark J Pallen et al.   Genome Medicine

Diverse perspectives on the current state of genomic medicine: has the revolution begun?

(2011) Dhara M MacDermed et al.   Genome Medicine

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

(2011) Daniel Aird et al.   GENOME BIOLOGY

Hybrid selection for sequencing pathogen genomes from clinical samples

(2011) Alexandre Melnikov et al.   GENOME BIOLOGY

High-throughput sequencing and clinical microbiology: progress, opportunities and challenges

(2010) Mark J Pallen et al.   CURRENT OPINION IN MICROBIOLOGY

The Origin of the Haitian Cholera Outbreak Strain

(2010) Chen-Shan Chin et al.   NEW ENGLAND JOURNAL OF MEDICINE

A unique family of Mrr-like modification-dependent restriction endonucleases

(2010) Yu Zheng et al.   NUCLEIC ACIDS RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Human DNA methylomes at base resolution show widespread epigenomic differences

(2009) Ryan Lister et al.   NATURE