4.7 Article

Linear Scaling Self-Consistent Field Calculations with Millions of Atoms in the Condensed Phase

期刊

JOURNAL OF CHEMICAL THEORY AND COMPUTATION
卷 8, 期 10, 页码 3565-3573

出版社

AMER CHEMICAL SOC
DOI: 10.1021/ct200897x

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资金

  1. European Union FP7, ERC Starting Grant [277910]
  2. Office of Science of the U.S. DOE [DE-AC05-00OR22725]
  3. Swiss National Super-computer Centre (CSCS)
  4. European Community [RI-261557]
  5. Swiss University Conference through the High Performance and High Productivity Computing (HP2C) Programme

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In this work, the applicability and performance of a linear scaling algorithm is investigated for three-dimensional condensed phase systems. A simple but robust approach based on the matrix sign function is employed together with a thresholding matrix multiplication that does not require a prescribed sparsity pattern. Semiempirical methods and density functional theory have been tested. We demonstrate that self-consistent calculations with 1 million atoms are feasible for simple systems. With this approach, the computational cost of the calculation depends strongly on basis set quality. In the current implementation, high quality calculations for dense systems are limited to a few hundred thousand atoms. We report on the sparsities of the involved matrices as obtained at convergence and for intermediate iterations. We investigate how determining the chemical potential impacts the computational cost for very large systems.

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