4.7 Article

On the photophysics and photochemistry of the water dimer

期刊

JOURNAL OF CHEMICAL PHYSICS
卷 137, 期 24, 页码 -

出版社

AMER INST PHYSICS
DOI: 10.1063/1.4772187

关键词

-

资金

  1. MEC [CTQ2010-14892, CSD2007-0010]
  2. European Research Council under the European Community [255363]

向作者/读者索取更多资源

The photochemistry of the water dimer irradiated by UV light is studied by means of the complete active space perturbation theory//complete active space self-consistent field (CASPT2//CASSCF) method and accurate computational approaches like as minimum energy paths. Both electronic structure computations and ab initio molecular dynamics simulations are carried out. The results obtained show small shifts relative to a single water molecule on the vertical excitation energies of the dimer due to the hydrogen bond placed between the water donor (W-D) and the water acceptor (W-A). A red-shift and a blue-shift are predicted for the W-D and W-A, respectively, supporting previous theoretical and experimental results. The photoinduced chemistry of the water dimer is described as a process occurring between two single water molecules in which the effect of the hydrogen bond plays a minor role. Thus, the photoinduced decay routes correspond to two photodissociation processes, one for each water molecule. The proposed mechanism for the decay channels of the lowest-lying excited states of the system is established as the photochemical production of a hydrogen-bonded H2O center dot center dot center dot HO species plus a hydrogen H atom. (C) 2012 American Institute of Physics. [http://dx.doi.org/10.1063/1.4772187]

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.7
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Chemistry, Physical

Quantum-chemistry study of the ground and excited state absorption of distyrylbenzene: Multi vs single reference methods

Juan Carlos Roldao, Eliezer Fernando Oliveira, Begona Milian-Medina, Johannes Gierschner, Daniel Roca-Sanjuan

Summary: State-of-the-art CASPT2 calculations are used to investigate the effect of double excitations on the GSA and ESA spectra of distyrylbenzene. The multi-reference results provide a more accurate description of electronic transitions compared to DFT results. Careful selection of the active space and basis set in the CASPT2 approach allows for a reliable description of spectral features, with cost-effective DFT-based geometries being applicable without significant loss of accuracy. Double excitations play a crucial role in higher excited states in the GSA spectrum, but have minimal impact on discernible spectral features. In the more complex ESA, a multiconfigurational treatment with double (and higher) excitations is essential.

JOURNAL OF CHEMICAL PHYSICS (2022)

Article Chemistry, Physical

Photoswitching activation of a ferrocenyl-stilbene analogue by its covalent grafting to gold

Francesc Bejarano, Diego Gutierrez, Jose Catalan-Toledo, Daniel Roca-Sanjuan, Johannes Gierschner, Jaume Veciana, Marta Mas-Torrent, Concepcio Rovira, Nuria Crivillers

Summary: This study investigates the photoisomerization of an asymmetrically substituted styrene containing a redox-active ferrocene moiety and a terminal alkyne group in solution, and upon forming chemisorbed self-assembled monolayers. The charge transport measurements across the monolayers show that there is an alteration of the isomerization pathway when linked to the gold substrate, favoring trans to cis conversion compared to solution. The experimental results are interpreted based on quantum chemistry calculations.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2022)

Article Geosciences, Multidisciplinary

The Chemistry of Mercury in the Stratosphere

Alfonso Saiz-Lopez, A. Ulises Acuna, Anoop S. Mahajan, Juan Z. Davalos, Wuhu Feng, Daniel Roca-Sanjuan, Javier Carmona-Garcia, Carlos A. Cuevas, Douglas E. Kinnison, Juan Carlos Gomez Martin, Joseph S. Francisco, John M. C. Plane

Summary: This article presents the first model of stratospheric mercury chemistry and identifies two distinct mercury chemical regimes. The study also reveals that the oxidation of mercury in the stratosphere is faster than previously assumed, but regulated by photo-reduction. The lifetime of mercury in the stratosphere shows a significant variation.

GEOPHYSICAL RESEARCH LETTERS (2022)

Article Chemistry, Physical

Regularized CASPT2: an Intruder-State-Free Approach

Stefano Battaglia, Lina Fransen, Ignacio Fdez. Galvan, Roland Lindh

Summary: In this work, a new approach called sigma(p)-CASPT2 based on sigma p regularization is proposed to fix the intruder-state problem (ISP) in CASPT2. The effectiveness of sigma(p)-CASPT2 in removing the ISP and the sensitivity of the approach to input parameters are analyzed and compared to previous techniques. It is found that sigma p- CASPT2 performs better compared to previous approaches and different versions have different potential applications. The analysis also reveals the unsuitability of the real level shift technique as a general way to avoid the ISP.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2022)

Article Chemistry, Physical

Accurate Calculation of Excited-State Absorption for Small-to-Medium-Sized Conjugated Oligomers: Multiconfigurational Treatment vs Quadratic Response TD-DFT

Juan Carlos Roldao, Eliezer Fernando Oliveira, Begona Milian-Medina, Johannes Gierschner, Daniel Roca-Sanjuan

Summary: This study investigates the calculation of excited-state absorption spectra using QR TD-DFT and CASPT2 for oligophenylenevinylenes and oligothiophenes. CASPT2 provides a reliable description of the spectra, while QR TD-DFT gives reasonable results under certain conditions. The failure of QR TD-DFT is attributed to incomplete configuration description and improper MO description.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2022)

Article Chemistry, Physical

Analytic First-Order Derivatives of (X)MS, XDW, and RMS Variants of the CASPT2 and RASPT2 Methods

Yoshio Nishimoto, Stefano Battaglia, Roland Lindh

Summary: In this study, analytic derivatives of three CASPT2 variants and an RASPT2 extension were developed to locate minimum energy conical intersections. The results showed that the three CASPT2 variants had qualitatively similar predictions, but the recently developed RMS-CASPT2 was least sensitive to the number of states considered. CASPT2 and reference self-consistent field calculations predicted different energetics and bond lengths.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2022)

Article Multidisciplinary Sciences

Photochemical and thermochemical pathways to S2 and polysulfur formation in the atmosphere of Venus

Antonio Frances-Monerris, Javier Carmona-Garcia, Tarek Trabelsi, Alfonso Saiz-Lopez, James R. Lyons, Joseph S. Francisco, Daniel Roca-Sanjuan

Summary: This study presents a novel mechanism for the formation of polysulfur compounds in the atmosphere of Venus, demonstrating the production of S-2 and filling critical data gaps.

NATURE COMMUNICATIONS (2022)

Article Chemistry, Physical

Analytic gradients for compressed multistate pair-density functional theory

Jie J. Bao, Matthew R. Hermes, Thais R. Scott, Andrew M. Sand, Roland Lindh, Laura Gagliardi, Donald G. Truhlar

Summary: This paper reports the implementation of analytic gradients for CMS-PDFT in both OpenMolcas and PySCF, and illustrates the use of these gradients by applying the method to the excited states of formaldehyde and phenol.

MOLECULAR PHYSICS (2022)

Article Chemistry, Medicinal

Simulation Reveals the Chameleonic Behavior of Macrocycles

Daniel Sethio, Vasanthanathan Poongavanam, Ruisheng Xiong, Mohit Tyagi, Duc Duy Vo, Roland Lindh, Jan Kihlberg

Summary: Conformational analysis is crucial for the design of bioactive molecules, and it becomes even more challenging for macrocycles due to their unique characteristics. In this study, we simulated the conformations of five designed macrocycles and verified the results against experimental measurements. Our simulations accurately predicted the intramolecular interactions and revealed a solvent-induced conformational switch of the macrocyclic ring. This provides a foundation for the rational design of molecular chameleons that can adapt to different environments.

JOURNAL OF CHEMICAL INFORMATION AND MODELING (2023)

Article Chemistry, Physical

Smooth Things Come in Threes: A Diabatic Surrogate Model for Conical Intersection Optimization

Ignacio Fdez Galvan, Roland Lindh

Summary: In this study, a pseudodiabatic surrogate model is developed based on Gaussian process regression, which accurately reproduces the adiabatic surfaces and significantly reduces the computational effort required to obtain minimum energy crossing points using the restricted variance optimization method.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2023)

Article Chemistry, Physical

The OpenMolcas Web: A Community-Driven Approach to Advancing Computational Chemistry

Giovanni Li Manni, Ignacio Fdez. Galvan, Ali Alavi, Flavia Aleotti, Francesco Aquilante, Jochen Autschbach, Davide Avagliano, Alberto Baiardi, Jie J. Bao, Stefano Battaglia, Letitia Birnoschi, Alejandro Blanco-Gonzalez, Sergey I. Bokarev, Ria Broer, Roberto Cacciari, Paul B. Calio, Rebecca K. Carlson, Rafael Carvalho Couto, Luis Cerdan, Liviu F. Chibotaru, Nicholas F. Chilton, Jonathan Richard Church, Irene Conti, Sonia Coriani, Juliana Cuellar-Zuquin, Razan E. Daoud, Nike Dattani, Piero Decleva, Coen de Graaf, Mickael G. Delcey, Luca De Vico, Werner Dobrautz, Sijia S. Dong, Rulin Feng, Nicolas Ferre, Michael Filatov (Gulak), Laura Gagliardi, Marco Garavelli, Leticia Gonzalez, Yafu Guan, Meiyuan Guo, Matthew R. Hennefarth, Matthew R. Hermes, Chad E. Hoyer, Miquel Huix-Rotllant, Vishal Kumar Jaiswal, Andy Kaiser, Danil S. Kaliakin, Marjan Khamesian, Daniel S. King, Vladislav Kochetov, Marek Krosnicki, Arpit Arun Kumaar, Ernst D. Larsson, Susi Lehtola, Marie-Bernadette Lepetit, Hans Lischka, Pablo Lopez Rios, Marcus Lundberg, Dongxia Ma, Sebastian Mai, Philipp Marquetand, Isabella C. D. Merritt, Francesco Montorsi, Maximilian Morchen, Artur Nenov, Vu Ha Anh Nguyen, Yoshio Nishimoto, Meagan S. Oakley, Massimo Olivucci, Markus Oppel, Daniele Padula, Riddhish Pandharkar, Quan Manh Phung, Felix Plasser, Gerardo Raggi, Elisa Rebolini, Markus Reiher, Ivan Rivalta, Daniel Roca-Sanjuan, Thies Romig, Arta Anushirwan Safari, Aitor Sanchez-Mansilla, Andrew M. Sand, Igor Schapiro, Thais R. Scott, Javier Segarra-Marti, Francesco Segatta, Dumitru-Claudiu Sergentu, Prachi Sharma, Ron Shepard, Yinan Shu, Jakob K. Staab, Tjerk P. Straatsma, Lasse Kragh Sorensen, Bruno Nunes Cabral Tenorio, Donald G. Truhlar, Liviu Ungur, Morgane Vacher, Valera Veryazov, Torben Arne Voss, Oskar Weser, Dihua Wu, Xuchun Yang, David Yarkony, Chen Zhou, J. Patrick Zobel, Roland Lindh

Summary: This article describes the developments of the open-source OpenMolcas chemistry software environment since spring 2020, focusing on the novel functionalities in the stable branch and interfaces with other packages. These developments cover a wide range of topics in computational chemistry and provide an overview of the chemical phenomena and processes that OpenMolcas can address.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2023)

Article Multidisciplinary Sciences

Widespread detection of chlorine oxyacids in the Arctic atmosphere

Yee Jun Tham, Nina Sarnela, Siddharth Iyer, Qinyi Li, Helene Angot, Lauriane L. J. Quelever, Ivo Beck, Tiia Laurila, Lisa J. Beck, Matthew Boyer, Javier Carmona-Garcia, Ana Borrego-Sanchez, Daniel Roca-Sanjuan, Otso Perakyla, Roseline C. Thakur, Xu-Cheng He, Qiaozhi Zha, Dean Howard, Byron Blomquist, Stephen D. Archer, Ludovic Bariteau, Kevin Posman, Jacques Hueber, Detlev Helmig, Hans-Werner Jacobi, Heikki Junninen, Markku Kulmala, Anoop S. Mahajan, Andreas Massling, Henrik Skov, Mikko Sipila, Joseph S. Francisco, Julia Schmale, Tuija Jokinen, Alfonso Saiz-Lopez

Summary: Observations report the presence of HClO3 and HClO4 in the atmosphere, showing their widespread occurrence over the pan-Arctic during spring. These findings provide further insights into atmospheric chlorine cycling in the polar environment. The increase in HClO3 and HClO4 is linked to the increase in bromine levels, indicating the role of bromine chemistry in their formation and suggesting a previously missing atmospheric sink for reactive chlorine.

NATURE COMMUNICATIONS (2023)

Article Chemistry, Organic

Reductive Photocycloreversion of Cyclobutane Dimers Triggered by Guanines

Gemma M. Rodriguez-Muniz, Ana B. Fraga-Timiraos, Miriam Navarrete-Miguel, Ana Borrego-Sanchez, Daniel Roca-Sanjuan, Miguel A. Miranda, Virginie Lhiaubet-Vallet

Summary: The desire to achieve simple systems that can photoreductively split four-membered ring compounds is of interest in both inorganic chemistry and biochemistry, with the aim to mimic the activity of DNA photorepair enzymes. In this study, dyads containing the cyclobutane thymine dimer and guanine or 8-oxoguanine are synthesized, and their photoreactivities are compared. The results show that both dyads can split the ring, resulting in the formation of thymine, but with a lower quantum yield for the guanine derivative.

JOURNAL OF ORGANIC CHEMISTRY (2023)

Article Chemistry, Physical

The OpenMolcas Web: A Community-Driven Approach to Advancing Computational Chemistry

Giovanni Li Manni, Ignacio Fdez. Galvan, Ali Alavi, Flavia Aleotti, Francesco Aquilante, Jochen Autschbach, Davide Avagliano, Alberto Baiardi, Jie J. Bao, Stefano Battaglia, Letitia Birnoschi, Alejandro Blanco-Gonzalez, Sergey I. Bokarev, Ria Broer, Roberto Cacciari, Paul B. Calio, Rebecca K. Carlson, Rafael Carvalho Couto, Luis Cerdan, Liviu F. Chibotaru, Nicholas F. Chilton, Jonathan Richard Church, Irene Conti, Sonia Coriani, Juliana Cuellar-Zuquin, Razan E. Daoud, Nike Dattani, Piero Decleva, Coen de Graaf, Mickael G. Delcey, Luca De Vico, Werner Dobrautz, Sijia S. Dong, Rulin Feng, Nicolas Ferre, Michael Filatov(Gulak), Laura Gagliardi, Marco Garavelli, Leticia Gonzalez, Yafu Guan, Meiyuan Guo, Matthew R. Hennefarth, Matthew R. Hermes, Chad E. Hoyer, Miquel Huix-Rotllant, Vishal Kumar Jaiswal, Andy Kaiser, Danil S. Kaliakin, Marjan Khamesian, Daniel S. King, Vladislav Kochetov, Marek Krosnicki, Arpit Arun Kumaar, Ernst D. Larsson, Susi Lehtola, Marie-Bernadette Lepetit, Hans Lischka, Pablo Lopez Rios, Marcus Lundberg, Dongxia Ma, Sebastian Mai, Philipp Marquetand, Isabella C. D. Merritt, Francesco Montorsi, Maximilian Morchen, Artur Nenov, Vu Ha Anh Nguyen, Yoshio Nishimoto, Meagan S. Oakley, Massimo Olivucci, Markus Oppel, Daniele Padula, Riddhish Pandharkar, Quan Manh Phung, Felix Plasser, Gerardo Raggi, Elisa Rebolini, Markus Reiher, Ivan Rivalta, Daniel Roca-Sanjuan, Thies Romig, Arta Anushirwan Safari, Aitor Sanchez-Mansilla, Andrew M. Sand, Igor Schapiro, Thais R. Scott, Javier Segarra-Marti, Francesco Segatta, Dumitru-Claudiu Sergentu, Prachi Sharma, Ron Shepard, Yinan Shu, Jakob K. Staab, Tjerk P. Straatsma, Lasse Kragh Sorensen, Bruno Nunes Cabral Tenorio, Donald G. Truhlar, Liviu Ungur, Morgane Vacher, Valera Veryazov, Torben Arne Voss, Oskar Weser, Dihua Wu, Xuchun Yang, David Yarkony, Chen Zhou, J. Patrick Zobel, Roland Lindh

Summary: This article describes the recent developments in the open-source chemistry software environment, OpenMolcas, since spring 2020. It focuses on the new functionalities and interfaces with other packages. The article presents various topics in computational chemistry, including electronic structure theory, electronic spectroscopy simulations, molecular structure optimizations, ab initio molecular dynamics, and other new features. Overall, it highlights the capabilities of OpenMolcas in addressing chemical phenomena and processes, making it an attractive platform for advanced atomistic computer simulations.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2023)

Article Chemistry, Physical

3-Methylation alters excited state decay in photoionised uracil

Javier Segarra-Marti, Thierry Tran, Michael J. Bearpark

Summary: UV and VUV-induced processes in DNA/RNA nucleobases play a crucial role in understanding the photo-damaging and photo-protecting mechanisms in genetic material. This study models the events following photoionisation and electronic excitation in uracil and its methylated derivatives, finding that 3-methylation has the largest impact on photoionised decay compared to uracil itself, while 1- and 5-methylation only give differences in detail.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2022)

暂无数据