Low molecular weight oligomers of amyloid peptides display β-barrel conformations: A replica exchange molecular dynamics study in explicit solvent

Induced β -Barrel Formation of the Alzheimer's A β 25–35 Oligomers on Carbon Nanotube Surfaces: Implication for Amyloid Fibril Inhibition

(2009) Zhaoming Fu et al.   BIOPHYSICAL JOURNAL

Effect of β-sheet propensity on peptide aggregation

(2009) Giovanni Bellesia et al.   JOURNAL OF CHEMICAL PHYSICS

Structures and Thermodynamics of Alzheimer’s Amyloid-β Aβ(16−35) Monomer and Dimer by Replica Exchange Molecular Dynamics Simulations: Implication for Full-Length Aβ Fibrillation

(2009) Yassmine Chebaro et al.   JOURNAL OF PHYSICAL CHEMISTRY B

PEP-FOLD: an online resource for de novo peptide structure prediction

(2009) J. Maupetit et al.   NUCLEIC ACIDS RESEARCH

Stability of single sheet GNNQQNY aggregates analyzed by replica exchange molecular dynamics: Antiparallel versus parallel association

(2008) Luigi Vitagliano et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

A Single Mutation in the Nonamyloidogenic Region of Islet Amyloid Polypeptide Greatly Reduces Toxicity†

(2008) Jeffrey R. Brender et al.   BIOCHEMISTRY

Investigating the Mechanism of Peptide Aggregation: Insights from Mixed Monte Carlo-Molecular Dynamics Simulations

(2008) Massimiliano Meli et al.   BIOPHYSICAL JOURNAL

Insights into Stability and Toxicity of Amyloid-Like Oligomers by Replica Exchange Molecular Dynamics Analyses

(2008) Alfonso De Simone et al.   BIOPHYSICAL JOURNAL

Amyloid β -Protein Assembly as a Therapeutic Target of Alzheimers Disease

(2008) Ghiam Yamin et al.   CURRENT PHARMACEUTICAL DESIGN

Self-assembly of amyloid-forming peptides by molecular dynamics simulations

(2008) Guanghong Wei   Frontiers in Bioscience-Landmark

Annular Protofibrils Are a Structurally and Functionally Distinct Type of Amyloid Oligomer

(2008) Rakez Kayed et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural Basis for the Interaction ofisoDGR with the RGD-binding Site of αvβ3 Integrin

(2008) Andrea Spitaleri et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural Classification of Toxic Amyloid Oligomers

(2008) Charles G. Glabe   JOURNAL OF BIOLOGICAL CHEMISTRY

Annular Structures as Intermediates in Fibril Formation of Alzheimer Aβ17−42

(2008) Jie Zheng et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Simulation Study of Noncovalent Hybridization of Carbon Nanotubes by Single-Stranded DNA in Water†

(2008) Willis Martin et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Self-Assembly of the β2-Microglobulin NHVTLSQ Peptide Using a Coarse-Grained Protein Model Reveals a β-Barrel Species

(2008) Wei Song et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Conformation and Dynamics of a Rhodamine Probe Attached at Two Sites on a Protein: Implications for Molecular Structure Determinationin situ

(2008) Alfonso De Simone et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Peptide folding kinetics from replica exchange molecular dynamics

(2008) Nicolae-Viorel Buchete et al.   PHYSICAL REVIEW E

Role of the familial Dutch mutation E22Q in the folding and aggregation of the 15-28 fragment of the Alzheimer amyloid-  protein

(2008) A. Baumketner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of the human voltage-dependent anion channel

(2008) M. Bayrhuber et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Thermodynamics and dynamics of amyloid peptide oligomerization are sequence dependent

(2008) Yan Lu et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

New structures help the modeling of toxic amyloidß ion channels

(2008) Hyunbum Jang et al.   TRENDS IN BIOCHEMICAL SCIENCES

Formation and Growth of Oligomers: A Monte Carlo Study of an Amyloid Tau Fragment

(2008) Da-Wei Li et al.   PLoS Computational Biology

Disordered Flanks Prevent Peptide Aggregation

(2008) Sanne Abeln et al.   PLoS Computational Biology

Spontaneous β-barrel formation: An all-atom Monte Carlo study of Aβ16–22 oligomerization

(2007) Anders Irbäck et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS