Computing the conformational entropy for RNA folds

Predicting loop-helix tertiary structural contacts in RNA pseudoknots

(2010) S. Cao et al.   RNA

Predicting structures and stabilities for H-type pseudoknots with interhelix loops

(2009) S. Cao et al.   RNA

Prediction of geometrically feasible three-dimensional structures of pseudoknotted RNA through free energy estimation

(2009) J. Zhang et al.   RNA

RNA Folding: Conformational Statistics, Folding Kinetics, and Ion Electrostatics

(2008) Shi-Jie Chen   Annual Review of Biophysics

Salt Dependence of Nucleic Acid Hairpin Stability

(2008) Zhi-Jie Tan et al.   BIOPHYSICAL JOURNAL

Conformational Entropy of an Ideal Cross-Linking Polymer Chain

(2008) Oleg Vorov et al.   Entropy

Discrete state model and accurate estimation of loop entropy of RNA secondary structures

(2008) Jian Zhang et al.   JOURNAL OF CHEMICAL PHYSICS

RNA backbone: Consensus all-angle conformers and modular string nomenclature (an RNA Ontology Consortium contribution)

(2008) J. S. Richardson et al.   RNA