Article
Biochemistry & Molecular Biology
Kabsun Kim, Jung Ha Kim, Inyoung Kim, Semun Seong, Jeong Eun Han, Keun-Bae Lee, Jeong-Tae Koh, Nacksung Kim
Summary: Lmx1b negatively regulates osteoblast differentiation and function through repression of Runx2, providing a molecular basis for therapeutic targets in bone diseases.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Review
Biochemistry & Molecular Biology
Toshihisa Komori
Summary: Runx2 is a crucial transcription factor in bone development, playing a key role in the maturation and proliferation of chondrocytes and osteoblasts.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Biochemistry & Molecular Biology
Kyung-Ran Park, Joon Yeop Lee, Myounglae Cho, Jin Tae Hong, Hyung-Mun Yun
Summary: Paeonoside (PASI) isolated from Paeonia suffruticosa roots enhances osteoblast migration, early differentiation, and mineralized nodule formation by regulating RUNX2 expression through the BMP2 and Wnt3a pathways, suggesting a potential therapeutic role in treating bone diseases.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Cell Biology
Thomas H. Shin, Evangelos Theodorou, Carl Holland, Rae'e Yamin, Cathleen L. Raggio, Philip F. Giampietro, David A. Sweetser
Summary: This study identified a previously unrecognized role of Tle4 in bone calcification and investigated its impact on osteoblast function. Loss of Tle4 was shown to adversely affect bone development, potentially through regulation of key osteoblastogenic genes.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2021)
Review
Cell & Tissue Engineering
Li Zeng, Hong He, Mingjie Sun, Xinyi Gong, Mengqi Zhou, Yaya Hong, Yongjia Wu, Xuepeng Chen, Qianming Chen
Summary: Dental follicle progenitor cells (DFPCs) play important roles in tooth formation and eruption. The genes Runx2 and Nell-1 are involved in tooth eruption and are regulated by each other. Runx2 directly targets the Nell-1 gene and their axis may play a crucial role in tooth eruption by affecting DFPCs. However, further research is needed to understand the specific mechanisms.
STEM CELL RESEARCH & THERAPY
(2022)
Article
Multidisciplinary Sciences
Aaron N. Brooks, Amanda L. Hughes, Sandra Clauder-Muenster, Leslie A. Mitchell, Jef D. Boeke, Lars M. Steinmetz
Summary: This study investigates the effects of sequence features and transcriptional context on RNA transcript isoform expression. Using synthetic yeast strains with rearranged genes, the researchers discovered that neighboring transcription also influences gene expression levels and transcript isoform boundaries. They identified features of transcriptional context that can predict these alterations and successfully engineered a synthetic circuit where transcript length is controlled by neighboring transcription.
Review
Cell Biology
Xianyi Meng, Ben Wielockx, Martina Rauner, Aline Bozec
Summary: Hypoxia-inducible factors (HIFs) play a crucial role in regulating bone metabolism, angiogenesis, and inflammation, with significant impact on osteoclast activity. Their tight regulation by tissue microenvironments highlights their importance in bone pathologies.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2021)
Article
Nutrition & Dietetics
Kuaitian Wang, Xiao Kong, Mengdi Du, Wei Yu, Zhenhua Wang, Bo Xu, Jianrong Yang, Jingru Xu, Zhili Liu, Yongqiang Cheng, Jing Gan
Summary: The calcium-binding peptide DEDEQIPSHPPR derived from soy yogurt was found to stimulate osteoblast differentiation and bone mineralization through the activation of the RUNX2 via the T beta RI-p38-MAPK signaling pathways. These findings highlight the potential of CBP in treating osteoporosis.
Article
Multidisciplinary Sciences
Kosei Nagata, Hironori Hojo, Song Ho Chang, Hiroyuki Okada, Fumiko Yano, Ryota Chijimatsu, Yasunori Omata, Daisuke Mori, Yuma Makii, Manabu Kawata, Taizo Kaneko, Yasuhide Iwanaga, Hideki Nakamoto, Yuji Maenohara, Naohiro Tachibana, Hisatoshi Ishikura, Junya Higuchi, Yuki Taniguchi, Shinsuke Ohba, Ung-il Chung, Sakae Tanaka, Taku Saito
Summary: The transcription factors Runx2 and Runx3 play different roles in the development of osteoarthritis. Runx3 protects articular cartilage by regulating the expression of lubricin and aggrecan, while Runx2 exerts biphasic effects on osteoarthritis development under different conditions.
NATURE COMMUNICATIONS
(2022)
Article
Multidisciplinary Sciences
Luezhen Yuan, Bibhas Roy, Prasuna Ratna, Caroline Uhler, G. Shivashankar
Summary: Long-term sustained mechano-chemical signals in tissue microenvironment regulate cell-state transitions. In this study, the authors identified Lef1 as a critical somatic transcription factor for mechanically induced cell-state transitions. They showed that Lef1 knockdown resulted in the down-regulation of fibroblast dedifferentiation and identified potential signaling pathways upstream of Lef1 activation. This research describes an important mechanotransduction pathway for fibroblast dedifferentiation.
SCIENTIFIC REPORTS
(2022)
Article
Oncology
Beihui Huang, Huixin Liu, Szehoi Chan, Junru Liu, Jingli Gu, Meilan Chen, Lifen Kuang, Xiaozhe Li, Xingding Zhang, Juan Li
Summary: RUNX2 is a transcription factor that is involved in osteoblast differentiation and chondrocyte maturation, and it plays a crucial role in cancer invasion and metastasis. Recent research has shown a correlation between RUNX2 and bone destruction in cancers. In this study, the authors investigated the effects of conditioned medium from myeloma cells on preosteoblasts and preosteoclasts, as well as the role of RUNX2 in bone destruction in multiple myeloma. Their findings suggest that inhibiting RUNX2 may protect against bone destruction by maintaining the balance between osteoblast and osteoclast activity in multiple myeloma.
Article
Cell Biology
Jianmei Chen, Di Liu, Bo Chen, Yang Yang, Hongying Zhu, Danyang Li, Kun Liu, Lina Zhu, Hongrui Liu, Minqi Li, Xu Zhang, Xiangzhi Li
Summary: Mof plays a role in promoting osteoblast differentiation by increasing the expression of Runx2 and Osterix through histone H4K16 acetylation. Mof also directly interacts with Runx2 and Osterix to further enhance osteoblast differentiation.
CELL AND TISSUE RESEARCH
(2023)
Article
Multidisciplinary Sciences
Kulisara Marupanthorn, Chairat Tantrawatpan, Pakpoom Kheolamai, Duangrat Tantikanlayaporn, Sirikul Manochantr
Summary: This study investigates the effect of BMP-2 on osteogenic differentiation of chorion- and placenta-derived MSCs, showing that BMP-2 enhances osteogenic differentiation of MSCs and miRNAs play a regulatory role in this process.
SCIENTIFIC REPORTS
(2021)
Article
Biochemistry & Molecular Biology
Kyung-Ran Park, Joon Yeop Lee, Myounglae Cho, Jin Tae Hong, Hyung-Mun Yun
Summary: PALI from Paeonia suffruticosa promotes early and late osteoblast differentiation without cytotoxicity, mainly through the ERK1/2-RUNX2 signaling pathway, which suggests its potential therapeutic action in bone diseases like osteoporosis and periodontitis.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Multidisciplinary Sciences
Yoshiki Omatsu, Shota Aiba, Tomonori Maeta, Kei Higaki, Kazunari Aoki, Hitomi Watanabe, Gen Kondoh, Riko Nishimura, Shu Takeda, Ung-il Chung, Takashi Nagasawa
Summary: The transcription factors Runx1 and Runx2 play critical roles in the cellular niches of hematopoietic stem cells (HSCs). Lack of these transcription factors in CAR cells is associated with increased fibrosis and reduced HSCs in bone marrow. Runx1 is predominantly expressed in CAR cells and is induced by the transcription factor Foxc1, which decreases fibrotic gene expression in CAR cells.
NATURE COMMUNICATIONS
(2022)
Article
Hematology
Ying Wang, Ying Cao, Satsuki Yamada, Mahesh Thirunavukkarasu, Veronica Nin, Mandip Joshi, Muhammed T. Rishi, Santanu Bhattacharya, Juliana Camacho-Pereira, Anil K. Sharma, Khader Shameer, Jean-Pierre A. Kocher, Juan A. Sanchez, Enfeng Wang, Luke H. Hoeppner, Shamit K. Dutta, Edward B. Leof, Vijay Shah, Kevin P. Claffey, Eduardo N. Chini, Michael Simons, Andre Terzic, Nilanjana Maulik, Debabrata Mukhopadhyay
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY
(2015)
Correction
Cell Biology
Luke H. Hoeppner, Sutapa Sinha, Ying Wang, Resham Bhattacharya, Shamit Dutta, Xun Gong, Victoria M. Bedell, Sandip Suresh, Changzoon Chun, Ramani Ramchandran, Stephen C. Ekker, Debabrata Mukhopadhyay
JOURNAL OF CELL SCIENCE
(2018)
Article
Biochemical Research Methods
Ting-You Wang, Li Wang, Sk Kayum Alam, Luke H. Hoeppner, Rendong Yang
Article
Biochemistry & Molecular Biology
Ying Wang, Luke H. Hoeppner, Ramcharan Singh Angom, Enfeng Wang, Shamit Dutta, Heike R. Doeppler, Fei Wang, Tao Shen, Isobel A. Scarisbrick, Sushovan Guha, Peter Storz, Resham Bhattacharya, Debabrata Mukhopadhyay
JOURNAL OF BIOLOGICAL CHEMISTRY
(2019)
Article
Oncology
Sk. Kayum Alam, Li Wang, Yanan Ren, Christina E. Hernandez, Farhad Kosari, Anja C. Roden, Rendong Yang, Luke H. Hoeppner
BRITISH JOURNAL OF CANCER
(2020)
Article
Endocrinology & Metabolism
Marina G. Ferrari, Arsheed A. Ganaie, Ashraf Shabenah, Adrian P. Mansini, Li Wang, Paari Murugan, Elai Davicioni, Jinhua Wang, Yibin Deng, Luke H. Hoeppner, Christopher A. Warlick, Badrinath R. Konety, Mohammad Saleem
Article
Biochemistry & Molecular Biology
Ting-You Wang, Qi Liu, Yanan Ren, Sk Kayum Alam, Li Wang, Zhu Zhu, Luke H. Hoeppner, Scott M. Dehm, Qi Cao, Rendong Yang
Summary: Exitron splicing (EIS) functions in cancer by affecting 63% of human coding genes, 95% of which are tumor specific. EIS alters cancer driver genes, leading to gain- or loss-of-function, and also produces neoepitopes that bind to MHC class I or II. Analysis of clinical data shows a correlation between EIS-derived neoantigen load and checkpoint inhibitor response in clear cell renal cell carcinoma.
Article
Biochemistry & Molecular Biology
Helena Jambor, Alberto Antonietti, Bradly Alicea, Tracy L. Audisio, Susann Auer, Vivek Bhardwaj, Steven J. Burgess, Iuliia Ferling, Malgorzata Anna Gazda, Luke H. Hoeppner, Vinodh Ilangovan, Hung Lo, Mischa Olson, Salem Yousef Mohamed, Sarvenaz Sarabipour, Aalok Varma, Kaivalya Walavalkar, Erin M. Wissink, Tracey L. Weissgerber
Summary: While many resources discuss fraudulent image manipulation and technical specifications for image acquisition, data on the legibility and interpretability of images are scarce, and common problems still exist in non-blot images published in three fields, such as missing scale bars and misplaced or poorly marked insets.
Article
Cell Biology
Li Wang, Matteo Astone, Sk Kayum Alam, Zhu Zhu, Wuhong Pei, David A. Frank, Shawn M. Burgess, Luke H. Hoeppner
Summary: Vascular permeability triggered by inflammation or ischemia promotes edema and worsens disease progression, while VEGF plays a crucial role in regulating vascular barrier function. Targeting STAT3 can effectively reduce vascular permeability induced by VEGF.
DISEASE MODELS & MECHANISMS
(2021)
Article
Medicine, General & Internal
Stella P. Hartono, Victoria M. Bedell, Sk Kayum Alam, Madelyn O'Gorman, MaKayla Serres, Stephanie R. Hall, Krishnendu Pal, Rachel A. Kudgus, Priyabrata Mukherjee, Davis M. Seelig, Alexander Meves, Debabrata Mukhopadhyay, Stephen C. Ekker, Luke H. Hoeppner
Summary: This study demonstrates that activation of the VEGF pathway is a direct consequence of acute UV exposure and plays a role in the development of sunburn. Targeting VEGF signaling can prevent the acute effects of sunburn, suggesting a potential therapeutic approach for reducing UV-induced skin damage.
MAYO CLINIC PROCEEDINGS
(2022)
Article
Biochemistry & Molecular Biology
Sk. Kayum Alam, Yongchang Zhang, Li Wang, Zhu Zhu, Christina E. Hernandez, Yuling Zhou, Nong Yang, Jian Lei, Xiaoyan Chen, Liang Zeng, Mark A. Klein, Luke H. Hoeppner
Summary: The study reveals that DARPP-32 and kinase-activated EGFR and ERBB3 proteins are overexpressed in EGFR TKI-refractory LUAD, leading to the evasion of cell death through a specific mechanism.
Article
Multidisciplinary Sciences
Ying Wang, Ramcharan Singh Angom, Tanmay A. Kulkarni, Luke H. Hoeppner, Krishnendu Pal, Enfeng Wang, Alexander Tam, Rachael A. Valiunas, Shamit K. Dutta, Baoan Ji, Natalia Jarzebska, Yingjie Chen, Roman N. Rodionov, Debabrata Mukhopadhyay
Summary: The study revealed that acute and chronic exposures to VEGF induce divergent signaling pathways. DDAH1 plays essential roles in both acute and chronic vascular permeability. The findings suggest that DDAH1 could be a potential therapeutic target for vascular hyperpermeability-mediated pathogenesis.
Article
Hematology
Kathryn N. Phoenix, Zhichao Yue, Lixia Yue, Chunxia G. Cronin, Bruce T. Liang, Luke H. Hoeppner, Kevin P. Claffey
Summary: This study identifies PLC beta 2 as a key regulator of vascular permeability induced by VEGF, functioning through regulation of calcium flux and phosphatidylinositol 4,5-bisphosphate levels. Targeting PLC beta 2 could provide a novel approach to regulate vascular permeability in patients.
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY
(2022)
Article
Biology
Sk Kayum Alam, Matteo Astone, Ping Liu, Stephanie R. Hall, Abbygail M. Coyle, Erin N. Dankert, Dane K. Hoffman, Wei Zhang, Rui Kuang, Anja C. Roden, Aaron S. Mansfield, Luke H. Hoeppner
COMMUNICATIONS BIOLOGY
(2018)
Article
Oncology
Arsheed A. Ganaie, Firdous H. Beigh, Matteo Astone, Marina G. Ferrari, Raihana Maqbool, Syed Umbreen, Aijaz S. Parray, Hifzur R. Siddique, Tabish Hussain, Paari Murugan, Colm Morrissey, Shahriar Koochekpour, Yibin Deng, Badrinath R. Konety, Luke H. Hoeppner, Mohammad Saleem
CLINICAL CANCER RESEARCH
(2018)