Comparison of a PreQ1Riboswitch Aptamer in Metabolite-bound and Free States with Implications for Gene Regulation

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

A Rearrangement of the Guanosine-Binding Site Establishes an Extended Network of Functional Interactions in theTetrahymenaGroup I Ribozyme Active Site

(2010) Marcello Forconi et al.   BIOCHEMISTRY

Ribozymes and Riboswitches: Modulation of RNA Function by Small Molecules

(2010) Jinwei Zhang et al.   BIOCHEMISTRY

Structural characterization of proteins and complexes using small-angle X-ray solution scattering

(2010) Haydyn D.T. Mertens et al.   JOURNAL OF STRUCTURAL BIOLOGY

Structural Insights into Ligand Recognition by a Sensing Domain of the Cooperative Glycine Riboswitch

(2010) Lili Huang et al.   MOLECULAR CELL

Folding of a transcriptionally acting PreQ1 riboswitch

(2010) U. Rieder et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Roseoflavin is a natural antibacterial compound that binds to FMN riboswitches and regulates gene expression

(2010) Elaine R. Lee et al.   RNA Biology

Determination of riboswitch structures: Light at the end of the tunnel?

(2010) Alexander Serganov   RNA Biology

Riboswitch function: Flipping the switch or tuning the dimmer?

(2010) Nathan J. Baird et al.   RNA Biology

Structural basis for recognition of S-adenosylhomocysteine by riboswitches

(2010) A. L. Edwards et al.   RNA

Free State Conformational Sampling of the SAM-I Riboswitch Aptamer Domain

(2010) Colby D. Stoddard et al.   STRUCTURE

Averaged kick maps: less noise, more signal…and probably less bias

(2009) Jure Pražnikar et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

The Deazapurine Biosynthetic Pathway Revealed: In Vitro Enzymatic Synthesis of PreQ0from Guanosine 5′-Triphosphate in Four Steps

(2009) Reid M. McCarty et al.   BIOCHEMISTRY

Evidence for Pseudoknot Formation of Class I preQ1Riboswitch Aptamers

(2009) Ulrike Rieder et al.   CHEMBIOCHEM

The Structural Basis for Recognition of the PreQ0Metabolite by an Unusually Small Riboswitch Aptamer Domain

(2009) Robert C. Spitale et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Ligand-Free State of the TPP Riboswitch: A Partially Folded RNA Structure

(2009) Mona Ali et al.   JOURNAL OF MOLECULAR BIOLOGY

Structural Insights into Riboswitch Control of the Biosynthesis of Queuosine, a Modified Nucleotide Found in the Anticodon of tRNA

(2009) Mijeong Kang et al.   MOLECULAR CELL

Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli

(2009) Bryson D Bennett et al.   Nature Chemical Biology

Cocrystal structure of a class I preQ1 riboswitch reveals a pseudoknot recognizing an essential hypermodified nucleobase

(2009) Daniel J Klein et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structural basis of ligand binding by a c-di-GMP riboswitch

(2009) Kathryn D Smith et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Riboswitch structure: an internal residue mimicking the purine ligand

(2009) Vanessa Delfosse et al.   NUCLEIC ACIDS RESEARCH

New paradigm for macromolecular crystallography experiments at SSRL: automated crystal screening and remote data collection

(2008) S. Michael Soltis et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Deciphering Deazapurine Biosynthesis: Pathway for Pyrrolopyrimidine Nucleosides Toyocamycin and Sangivamycin

(2008) Reid M. McCarty et al.   CHEMISTRY & BIOLOGY

High hydrostatic pressure small-angle X-ray scattering cell for protein solution studies featuring diamond windows and disposable sample cells

(2008) Nozomi Ando et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Crystal Structure of the Lysine Riboswitch Regulatory mRNA Element

(2008) Andrew D. Garst et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural insights into amino acid binding and gene control by a lysine riboswitch

(2008) Alexander Serganov et al.   NATURE

Confirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteria

(2008) M. M. Meyer et al.   RNA

Ligand-dependent folding of the three-way junction in the purine riboswitch

(2008) C. D Stoddard et al.   RNA