Two New Complete Genome Sequences Offer Insight into Host and Tissue Specificity of Plant Pathogenic Xanthomonas spp.

Genomic Analysis of Xanthomonas oryzae Isolates from Rice Grown in the United States Reveals Substantial Divergence from Known X. oryzae Pathovars

(2011) L. R. Triplett et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R

(2011) Hanbo Chen et al.   BMC BIOINFORMATICS

Sensing and adhesion are adaptive functions in the plant pathogenic xanthomonads

(2011) Nadia Mhedbi-Hajri et al.   BMC EVOLUTIONARY BIOLOGY

Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper

(2011) Neha Potnis et al.   BMC GENOMICS

Secretion, modification, and regulation of Ax21

(2011) Sang-Wook Han et al.   CURRENT OPINION IN MICROBIOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome sequencing and comparative analysis of the carrot bacterial blight pathogen, Xanthomonas hortorum pv. carotae M081, for insights into pathogenicity and applications in molecular diagnostics

(2011) JEFFREY A. KIMBREL et al.   MOLECULAR PLANT PATHOLOGY

XanthomonasAvrBs3 Family-Type III Effectors: Discovery and Function

(2010) Jens Boch et al.   Annual Review of Phytopathology

TAL effectors: finding plant genes for disease and defense

(2010) Adam J Bogdanove et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome-wide sequencing data reveals virulence factors implicated in banana Xanthomonas wilt

(2010) David J. Studholme et al.   FEMS MICROBIOLOGY LETTERS

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

A multilocus sequence analysis of Xanthomonas campestris reveals a complex structure within crucifer-attacking pathovars of this species

(2010) E. Fargier et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae

(2009) Isabelle Pieretti et al.   BMC GENOMICS

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

(2009) Dongying Wu et al.   NATURE

Host and Pathogen Factors Controlling the Rice-Xanthomonas oryzae Interaction

(2009) F. F. White et al.   PLANT PHYSIOLOGY

A Type I-Secreted, Sulfated Peptide Triggers XA21-Mediated Innate Immunity

(2009) S.-W. Lee et al.   SCIENCE

A Simple Cipher Governs DNA Recognition by TAL Effectors

(2009) M. J. Moscou et al.   SCIENCE

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

(2008) Steven L Salzberg et al.   BMC GENOMICS

The Xanthomonas oryzae pv. oryzae PhoPQ Two-Component System Is Required for AvrXA21 Activity, hrpG Expression, and Virulence

(2008) S.-W. Lee et al.   JOURNAL OF BACTERIOLOGY

The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis

(2008) Frank-Jörg Vorhölter et al.   JOURNAL OF BIOTECHNOLOGY

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Multiple Adhesin-Like Functions ofXanthomonas oryzaepv.oryzaeAre Involved in Promoting Leaf Attachment, Entry, and Virulence on Rice

(2008) Amit Das et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Acquisition and Evolution of Plant Pathogenesis–Associated Gene Clusters and Candidate Determinants of Tissue-Specificity in Xanthomonas

(2008) Hong Lu et al.   PLoS One

A putative colRXC1049–colSXC1050 two-component signal transduction system in Xanthomonas campestris positively regulates hrpC and hrpE operons and is involved in virulence, the hypersensitive response and tolerance to various stresses

(2008) Sui-Sheng Zhang et al.   RESEARCH IN MICROBIOLOGY

New substrates for TonB-dependent transport: do we only see the ‘tip of the iceberg’?

(2008) Kristine Schauer et al.   TRENDS IN BIOCHEMICAL SCIENCES

A simple, fast, and accurate method of phylogenomic inference

(2008) Martin Wu et al.   GENOME BIOLOGY

The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants

(2008) Lisa C Crossman et al.   GENOME BIOLOGY