Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill

Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill

(2013) Adam R Rivers et al.   ISME Journal

Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP

(2013) Tony Gutierrez et al.   ISME Journal

Deep-Sea Benthic Footprint of the Deepwater Horizon Blowout

(2013) Paul A. Montagna et al.   PLoS One

Metagenomic analysis and metabolite profiling of deep–sea sediments from the Gulf of Mexico following the Deepwater Horizon oil spill

(2013) Nikole E. Kimes et al.   Frontiers in Microbiology

Evaluating bacterial community structures in oil collected from the sea surface and sediment in the northern Gulf of Mexico after the deepwater horizon oil spill

(2013) Zhanfei Liu et al.   MicrobiologyOpen

Modeling of Phenoxy Acid Herbicide Mineralization and Growth of Microbial Degraders in 15 Soils Monitored by Quantitative Real-Time PCR of the FunctionaltfdAGene

(2012) Jacob Bælum et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill

(2012) Jacob Baelum et al.   ENVIRONMENTAL MICROBIOLOGY

Distribution andin situabundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments

(2012) Sara Kleindienst et al.   ENVIRONMENTAL MICROBIOLOGY

Marine snow formation in the aftermath of the Deepwater Horizon oil spill in the Gulf of Mexico

(2012) U Passow et al.   Environmental Research Letters

Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill

(2012) Olivia U Mason et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Stable Isotope Probing of an Algal Bloom To Identify Uncultivated Members of the Rhodobacteraceae Associated with Low-Molecular-Weight Polycyclic Aromatic Hydrocarbon Degradation

(2011) Tony Gutierrez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill

(2011) M. C. Redmond et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico

(2011) J. D. Kessler et al.   SCIENCE

Identifying biologically relevant differences between metagenomic communities

(2010) Donovan H. Parks et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

(2010) Terry C. Hazen et al.   SCIENCE

Propane Respiration Jump-Starts Microbial Response to a Deep Oil Spill

(2010) David L. Valentine et al.   SCIENCE

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS