New perspectives on viable microbial communities in low-biomass cleanroom environments

Pyrosequencing-Derived Bacterial, Archaeal, and Fungal Diversity of Spacecraft Hardware Destined for Mars

(2012) Myron T. La Duc et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

Detecting inactivated endospores in fluorescence microscopy using propidium monoazide

(2012) Alexander Probst et al.   International Journal of Astrobiology

Comparison of Innovative Molecular Approaches and Standard Spore Assays for Assessment of Surface Cleanliness

(2011) Moogega Cooper et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Evaluation of Procedures for the Collection, Processing, and Analysis of Biomolecules from Low-Biomass Surfaces

(2011) K. Kwan et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PCR Amplification-Independent Methods for Detection of Microbial Communities by the High-Density Microarray PhyloChip

(2011) Kristen M. DeAngelis et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys

(2011) Jeffrey J Werner et al.   ISME Journal

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Molecular pathogen detection in biosolids with a focus on quantitative PCR using propidium monoazide for viable cell enumeration

(2011) Jessica K. van Frankenhuyzen et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Quantification of viable Legionella pneumophila cells using propidium monoazide combined with quantitative PCR

(2011) M. Adela Yáñez et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

(2011) Patrick D. Schloss et al.   PLoS One

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Diversity of Anaerobic Microbes in Spacecraft Assembly Clean Rooms

(2010) A. Probst et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Use of Propidium Monoazide in Reverse Transcriptase PCR To Distinguish between Infectious and Noninfectious Enteric Viruses in Water Samples

(2010) S. Parshionikar et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

High-Density 16S Microarray and Clone Library–Based Microbial Community Composition of the Phoenix Spacecraft Assembly Clean Room

(2010) Parag Vaishampayan et al.   ASTROBIOLOGY

Recurrent Isolation of Extremotolerant Bacteria from the Clean Room Where Phoenix Spacecraft Components Were Assembled

(2010) Sudeshna Ghosh et al.   ASTROBIOLOGY

Real-time detection of viable microorganisms by intracellular phototautomerism

(2010) Remco Kort et al.   BMC BIOTECHNOLOGY

Comparison and Characterization of Microbial Communities in Sulfide-rich Wastewater with and without Propidium Monoazide Treatment

(2010) Wei-Tie Lin et al.   CURRENT MICROBIOLOGY

Determination of viable wine yeast using DNA binding dyes and quantitative PCR

(2010) Imma Andorrà et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Viable Real-Time PCR in Environmental Samples: Can All Data Be Interpreted Directly?

(2010) Mariana Fittipaldi et al.   MICROBIAL ECOLOGY

Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

(2010) Terry C. Hazen et al.   SCIENCE

Comprehensive Census of Bacteria in Clean Rooms by Using DNA Microarray and Cloning Methods

(2009) M. T. La Duc et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PCR-Based Method Using Propidium Monoazide To Distinguish Viable from Nonviable Bacillus subtilis Spores

(2009) H. Rawsthorne et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cryptosporidium Propidium Monoazide-PCR, a Molecular Biology-Based Technique for Genotyping of Viable Cryptosporidium Oocysts

(2009) C. C. Brescia et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Discrimination of Viable and Dead Fecal Bacteroidales Bacteria by Quantitative PCR with Propidium Monoazide

(2009) S. Bae et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Highly specialized microbial diversity in hyper-arid polar desert

(2009) S. B. Pointing et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Removal of Free Extracellular DNA from Environmental Samples by Ethidium Monoazide and Propidium Monoazide

(2008) A. O. Wagner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Survey of bacterial diversity in chronic wounds using Pyrosequencing, DGGE, and full ribosome shotgun sequencing

(2008) Scot E Dowd et al.   BMC MICROBIOLOGY

Assessing the diagnostic importance of nonviable bacterial cells in respiratory infections

(2008) Geraint B. Rogers et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Selective PCR detection of viableEnterobacter sakazakiicells utilizing propidium monoazide or ethidium bromide monoazide

(2008) D.-M. Cawthorn et al.   JOURNAL OF APPLIED MICROBIOLOGY

Selective detection of live bacteria combining propidium monoazide sample treatment with microarray technology

(2008) Andreas Nocker et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Quantifying fungal viability in air and water samples using quantitative PCR after treatment with propidium monoazide (PMA)

(2007) Stephen Vesper et al.   JOURNAL OF MICROBIOLOGICAL METHODS