Article
Microbiology
Hui-Jing Niu, Kai-Shi Dong, Li Guan, Li-Ping Sun, Qin Wang, Yan-Jiao Zhang, Yi Li, Cheng-Qiang Xia, Cai- Xia Pei
Summary: A novel species of the genus Gramella, named Gramella sediminis sp. nov., was isolated from tidal flat sediment in the Yellow Sea, PR China. It exhibits distinct gene sequences and enzymatic activities, and belongs to a genus known for its role in carbohydrate degradation.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Zhi-Cheng Wu, Xin-Yin Zhang, Cong Sun, Lin Xu, Ge-Yi Fu, Xue-Wei Xu
Summary: Strain TT11(T) is a novel halotolerant bacterium from the Aestuariibaculum genus, producing carotenoid-like pigments, with optimal growth at 35 degrees Celsius, pH 6.5, and tolerance to 0.5-1.0% NaCl.
ARCHIVES OF MICROBIOLOGY
(2021)
Article
Microbiology
Jihye Baek, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Summary: CAU 1483(T) is a newly discovered Gram-positive bacterium belonging to Cohnella pontilimi sp. nov., showing high salt tolerance and encoding sequences related to stress response.
ARCHIVES OF MICROBIOLOGY
(2021)
Article
Microbiology
Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
Summary: A novel species of the genus Mesonia, named Mesonia aestuariivivens sp. nov., was isolated from tidal flat sediment in Republic of Korea. The strain was characterized by its phenotypic properties, phylogenetic lineage, and genetic distinctiveness.
ARCHIVES OF MICROBIOLOGY
(2022)
Article
Microbiology
Sooyeon Park, Jung-Hoon Yoon
Summary: Strain TSTF-M16T, isolated from a tidal flat on the Yellow Sea, Republic of Korea, represents a novel species of the genus Sulfitobacter, named Sulfitobacter aestuariivivens sp. nov. The phylogenetic analysis and distinctive phenotypic properties support the separation of strain TSTF-M16T from recognized Sulfitobacter species.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Cheng-Qiang Xia, Hui-Jing Niu, Kai-Shi Dong, Li Guan, Li-Ping Sun, Qin Wang, Yan-Jiao Zhang, Yi Li, Cai-Xia Pei
Summary: A new species of the genus Salinimicrobium, designated Salinimicrobium sediminilitoris sp. nov., was isolated and characterized from a tidal flat sediment in Qingdao, PR China.
CURRENT MICROBIOLOGY
(2022)
Article
Microbiology
Chun-Yan Lu, Lei Dong, Shuai Li, Wen-Hui Lian, Zhi-Liang Lin, Zhuo-Huan Zheng, Lei Gao, Bao-Zhu Fang, Wen-Jun Li
Summary: A new actinobacterium, SYSU T00001(T), was isolated from a tidal flat sediment sample from Guangdong province, China. The isolate exhibited unique characteristics and showed highest similarity to Salinibacterium hongtaonis 194(T) based on phylogenetic analyses. Therefore, a novel species of the genus Salinibacterium, Salinibacterium sedimenticola sp. nov., is proposed, with SYSU T00001(T) as the type strain.
CURRENT MICROBIOLOGY
(2023)
Article
Microbiology
Yuxin Gao, Yuli Wei, Peng Wang
Summary: A new bacterial strain, designated as Marinomonas lutimaris sp. nov., was isolated from tidal flat sediment of the East China Sea. Based on phenotypic characteristics, phylogenetic analysis, and DNA-DNA relatedness, this new species was identified.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Han Dong, Ren-Zhuang Han, Yu Zhang, Maripat Xamxidin, Peng Zhou, Cong Sun, Wu Qu, Lin Xu
Summary: A novel strain belonging to the genus Parerythrobacter, named Parerythrobacter aestuarii sp. nov., was isolated from seawater in the tidal region of Taizhou. This strain showed unique growth conditions and biochemical characteristics, with low sequence identities to known Parerythrobacter strains.
CURRENT MICROBIOLOGY
(2023)
Article
Microbiology
Teddy Namirimu, Jhung-Ahn Yang, Sung-Hyun Yang, Jihyun Yu, Yun Jae Kim, Kae Kyoung Kwon
Summary: A novel bacterium, designated SCR006(T), was isolated from tidal flat sediment from Suncheon Bay, Republic of Korea. It is an anaerobic bacterium that grows by fermenting and produces acetate and ethanol as its fermentation products. Phylogenetic analysis confirms that it belongs to a new species within the genus Proteiniclasticum.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Tao Pei, Yang Liu, Juan Du, Kunpeng Huang, Ming-Rong Deng, Honghui Zhu
Summary: A novel Gram-staining-negative and short-rod-shaped bacterial strain 1NDH52(T) was isolated from a tidal flat sediment and identified as a new species Croceicoccus gelatinilyticus. The strain showed phylogenetic uniqueness in comparison to closely related strains, indicating its distinct genospecies status within the genus Croceicoccus.
ARCHIVES OF MICROBIOLOGY
(2022)
Article
Microbiology
Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
Summary: The study identified YSTF-M3(T) and YSTF-M6(T) as novel species of the genera Kordia and Olleya, respectively, based on unique phylogenetic and genetic characteristics. They have been named Kordia aestuari-ivivens sp. nov. and Olleya sediminilitoris sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Huda Mahmoud, Susan Eapen, Fatimah Al-Bajjali, Anwar Al-Qattan, Liny Jose
Summary: Strain SIJ1(T) is a novel Gram-positive bacterium isolated from tidal flat sediment in Kuwait Bay, with unique characteristics such as growth in high-salt conditions and an increased number of stress-resistance genes. The genomic analysis revealed it as a distinct genus with a genome size of 3,989,945 bp and containing 4085 predicted protein-encoding genes.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Juan Du, Yang Liu, Tao Pei, Anzhang Li, Honghui Zhu
Summary: A novel Gram-staining-negative, aerobic, rod-shaped, and white-colored bacterium named Ruegeria alba sp. nov. was isolated from a tidal flat sediment. It was found to grow under certain conditions and hydrolyze gelatin and aesculin.
CURRENT MICROBIOLOGY
(2022)
Article
Environmental Sciences
Ya-Ping Sun, Bei-Bei Wang, Zhang-Ping Wu, Xi-Wen Zheng, Jing Hou, Heng-Lin Cui
Summary: Five novel halophilic archaeal strains were isolated from coastal saline sediments and sea salt in China. They demonstrated typical morphology and growth characteristics and showed high similarities with existing species. However, based on genetic and phylogenetic analyses, it is confirmed that these strains represent five new species. This is the first report of a novel haloarchaeon isolated from a marine intertidal zone.
FRONTIERS IN MARINE SCIENCE
(2023)
Article
Ecology
Suhyun Kim, Ilnam Kang, Ji-Hui Seo, Jang-Cheon Cho
Article
Multidisciplinary Sciences
Jong-Geol Kim, So-Jeong Kim, Virginija Cvirkaite-Krupovic, Woon-Jong Yu, Joo-Han Gwak, Mario Lopez-Perez, Francisco Rodriguez-Valera, Mart Krupovic, Jang-Cheon Cho, Sung-Keun Rhee
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2019)
Article
Microbiology
Shan-Hui Li, Jaeho Song, Yeonjung Lim, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2020)
Article
Microbiology
Kira Moon, Jeong Ho Jeon, Ilnam Kang, Kwang Seung Park, Kihyun Lee, Chang-Jun Cha, Sang Hee Lee, Jang-Cheon Cho
Article
Microbiology
Juchan Hwang, Jaeho Song, Yeonjung Lim, Yochan Joung, Jang-Cheon Cho
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2020)
Article
Microbiology
Jaeho Song, Yochan Joung, Shan -Hui Li, Juchan Hwang, Jang- Cheon Cho
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2020)
Article
Multidisciplinary Sciences
Kira Moon, Suhyun Kim, Ilnam Kang, Jang-Cheon Cho
Article
Microbiology
Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2020)
Article
Microbiology
Miri S. Park, Jaeho Song, Jaeho Chang, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
Summary: The newly isolated bacterium IMCC34836(T) represents a novel species within the genus Permianibacter, with high sequence similarity to Permianibacter aggregans HW001(T). It has unique fatty acid and polar lipid compositions, and is proposed to be named Permianibacter fluminis sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Multidisciplinary Sciences
Suhyun Kim, Ilnam Kang, Jin-Won Lee, Che Ok Jeon, Stephen J. Giovannoni, Jang-Cheon Cho
Summary: This study reveals that the acI lineage, a predominant free-living bacterial group in freshwater habitats, is heme auxotrophic. While heme auxotrophy is commonly found in pathogens and symbionts, it is rare in free-living organisms. Furthermore, extensive genomic analysis shows that heme auxotrophy is widespread among other uncultivated microbial groups as well.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2021)
Article
Microbiology
Mirae Kim, Miri S. Park, Ilnam Kang, Jang- Cheon Cho
Summary: A new bacterium designated IMCC34681T was isolated from a lotus wetland in Korea. It was identified as a member of the genus Thermomonas based on 16S rRNA gene sequence analysis. The strain represents a novel genomic species and was named Thermomonas paludicola sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Shan-Hui Li, Ilnam Kang, Jang-Cheon Cho
Summary: This study provides insights into the phylogeny and metabolic potential of the family Halieaceae through genomic analyses of six pure cultured strains. The analyses revealed novel species representation and the presence of previously uncultured subclades. The strains exhibited aerobic chemo- or photoheterotrophic lifestyles, with some possessing genes for proteorhodopsin or aerobic anoxygenic phototrophy. Genes for CO2 fixation and polysaccharide utilization were also detected. These findings expand the phylogenetic and metabolic diversity of Halieaceae and are important for future ecophysiological studies.
MICROBIOLOGY SPECTRUM
(2023)
Article
Multidisciplinary Sciences
Yeonjung Lim, Ji-Hui Seo, Stephen J. Giovannoni, Ilnam Kang, Jang-Cheon Cho
Summary: Researchers successfully cultivated SAR202 bacteria from the ocean, which have slow growth and are inhibited by light exposure. These bacteria possess multiple enzyme paralogs involved in the metabolism of sugars and sugar acids. This study provides important insights into the physiology of SAR202 bacteria, which have been poorly understood.
NATURE COMMUNICATIONS
(2023)
Article
Multidisciplinary Sciences
Yeonjung Lim, Seung-Jo Yang, Ilnam Kang, Jang-Cheon Cho
Summary: This article presents a monthly time-series metagenomic dataset of the microbial communities in the East Sea, which can facilitate investigations into the marine microbial ecosystems in this region. The study reveals that the East Sea exhibits different biogeochemical features under seasonal fluctuations.
Article
Microbiology
Miri S. Park, Ilnam Kang, Jang-Cheon Cho
Summary: A novel bacterium belonging to the genus Zwartia was isolated from a freshwater stream in the Republic of Korea, named Zwartia vadi sp. nov. Additionally, it is proposed to reclassify 'Achromobacter panacis' as Zwartia panacis comb. nov.