Article
Microbiology
Qing-Yi Xie, Qing-Yun Ma, Ke-Xin Yi, Li Yang, Hao-Fu Dai, You -Xing Zhao
Summary: A novel actinobacterium strain (M4I6(T)) was isolated from marine sediment in Greece, and it was identified as a new species of the genus Actinoplanes. The strain showed high similarity to other Actinoplanes species, but its genome sequencing and DNA-DNA hybridization values distinguished it as a new species. Therefore, the name Actinoplanes maris sp. nov. is proposed for this strain.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Fei Li, Li Tuo, Qiao-Zhen Wang, Lian Yu, Fa-Jun Jiang, Jun-Xiang Lai, Shu-Shi Huang, Xian- Ling Qin
Summary: A taxonomic study was conducted on strain BGMRC 0090T, a Gram-negative, aerobic, flagellated, rod-shaped bacterium isolated from seawater. It exhibited algicidal activity and optimal growth at 30 degrees C, pH 6.0, and 2% (w/v) NaCl.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Hao Sun, Huina Zheng, Xiaolei Wang, Yiwei Jiang, Baolin Liao, Aihua Li, Baohua Xiao
Summary: A new species of Flavobacterium, named Flavobacterium coralii, was isolated from coral culture seawater. Its distinct characteristics and genetic sequence differentiate it from closely related species.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Xu Qiu, Xiaorong Cao, Guangxin Xu, Huangming Wu, Xixiang Tang
Summary: A novel halophilic bacterium, strain QX-1( T), was isolated from deep-sea sediment in the southwestern Indian Ocean. It belongs to the genus Halomonas and shows close phylogenetic relationship to other species. The novel species, named Halomonas maris, exhibits unique morphological, physiological, and chemical properties, as supported by phylogenetic, phenotypic, and chemotaxonomic analyses.
ARCHIVES OF MICROBIOLOGY
(2021)
Article
Microbiology
Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
Summary: A new Gram-negative bacterium was isolated from coral and identified as a potential new species in a new genus. The strain C21T shares 95.7% sequence identity to its closest neighbor based on 16S rRNA gene sequences. Phylogenetic analysis indicates that strain C21T forms a distinct branch in the family Cellvibrionaceae. Cellular fatty acids and polar lipids can also differentiate strain C21T from closely related type strains.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Seung Seob Bae, Yoon-Hee Jung, Yong Min Kwon, Dawoon Chung, Grace Choi, Kichul Cho, Woon-Jong Yu, Kyunghwa Baek
Summary: A new species of strictly aerobic, Gram-stain-negative, gliding, rod-shaped bacteria belonging to the genus Fulvivirga was isolated from a surface seawater sample collected at Gunsan marina, Republic of Korea. The strain, designated S481(T), exhibited distinct characteristics and genetic differences compared to other known species of the genus. Based on phenotypic and genotypic analysis, the name Fulvivirga lutea sp. nov. is proposed for this novel species.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Lei Shi, Kunlian Mo, Shixiang Bao, Qingjuan Wu, Chunmei Xue, Huiqin Huang
Summary: The bacterium HB182678(T) isolated from brown algae in Hainan province, China, belongs to the genus Mangrovicoccus and is proposed as a new species, Mangrovicoccus algicola sp. nov. It shows a wide range of growth conditions in terms of temperature, pH, and salt concentration, with specific isoprenoid quinone and fatty acid components.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Biotechnology & Applied Microbiology
Pavel Svec, Hans-Juergen Busse, Karel Sedlar, Jana Musilova, Stanislava Kralova, Eva Stankova, Ondrej Sedo, Daniel Krsek, Vendula Koublova, Lucie Kristofova, Ivo Sedlacek
Summary: A taxonomic study of bacterial strains isolated from wild Adelie penguins in Antarctica identified four new species in the genus Corynebacterium.
SYSTEMATIC AND APPLIED MICROBIOLOGY
(2023)
Article
Microbiology
Lena Schaffert, Matthias Ruwe, Johanna Milse, Katharina Hanuschka, Vera Ortseifen, Julian Droste, David Brandt, Laura Schluter, Yvonne Kutter, Svenja Vinke, Prisca Viehofer, Lucas Jacob, Nils-Christian Lubke, Eva Schulte-Berndt, Carsten Hain, Marten Linder, Pascal Schmidt, Lars Wollenschlager, Tobias Luttermann, Eric Thieme, Julia Hassa, Markus Haak, Manuel Wittchen, Almut Mentz, Marcus Persicke, Tobias Busche, Christian Ruckert
Summary: Three novel corynebacterial species were isolated from soil in Germany, characterized by their coccoid or irregular rod-shaped morphology and unique genetic structure. They were named Corynebacterium kalinowskii sp. nov., Corynebacterium comes sp. nov., and Corynebacterium occultum sp. nov. based on their phenotypic and genotypic characteristics.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Fei Li, Yuanlin Huang, Wenjin Hu, Zhe Li, Qiaozhen Wang, Shushi Huang, Fajun Jiang, Xinli Pan
Summary: Roseomonas coralli sp. nov. is a Gram-stain-negative, aerobic, non-motile bacterium with resistance to various metallic elements, and it grows under lower temperatures and acidic conditions.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Chi Young Hwang, Sung Man Seo, Eui-Sang Cho, Young-Do Nam, So-Lim Park, Seong-Il Lim, Myung-Ji Seo
Summary: In this study, a novel bacterial strain MBLB1776(T) was isolated from marine mud in Uljin, the Republic of Korea. The strain was identified as a new species within the genus Paenibacillus, named Paenibacillus aurantius sp. nov. It was found that MBLB1776(T) produced carotenoid pigments, giving the cells an orange color.
Article
Microbiology
Shiori Hirano, Takeshi Terahara, Koji Mori, Moriyuki Hamada, Ryo Matsumoto, Takeshi Kobayashi
Summary: A novel marine bacterium, Vallitalea longa sp. nov., strain SH18-1T, was isolated from sediment near Sado Island in Japan. This strain is anaerobic, Gram-stain-negative, rod-shaped, and motile. It has a wide temperature, salt concentration, and pH range for growth. Phylogenetic analysis shows its closest related species to be Vallitalea guaymasensis Ra1766G1T. The results indicate that strain SH18-1T represents a new species of the genus Vallitalea.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Wei Wang, Wenbin Zhao, Bingbing Cao, Ronghua Liu, Haojin Cheng, Peng Tian, Jiaguang Xiao, Ziqing Xu, Xiaolei Wang, Wentao Niu
Summary: A Gram-straining-negative, facultatively anaerobic, motile marine bacterium with a polar flagellum and rod-shaped morphology, named S4M6T, was isolated from surface seawater in Dongshan Bay, Fujian, PR China. Through phylogenetic and phylogenomic analysis, it was determined that S4M6T belongs to the genus Vibrio, and its closest relatives were Vibrio marisflavi CGMCC 1.8994T, Vibrio variabilis LMG 25438T, Vibrio gangliei SZDIS-1T, and Vibrio aestivus M22T. Based on polyphasic evidence, S4M6T is proposed as a novel species of Vibrio, named Vibrio sinus sp. nov. The importance of this article is rated 8 out of 10.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Li -Li Guo, Li-Dong Yi, Ming-Lei Wang, Yu-Rong Qian, Xue-Wei Xu, Ge- Yi Fu
Summary: A novel Gram-stain-negative bacterial strain, designated C281T, was isolated from seawater at the Marshallese seamount chain. It showed 92.7% sequence similarity with Membranihabitans marinus CZ-AZ5T based on 16S rRNA gene analysis. Phylogenetic analysis revealed that it formed a distinctive lineage within the family Saprospiraceae. The isolate represents a new species of the genus Membranihabitans, named Membranihabitans maritimus sp. nov. (type strain C281T=KCTC 92171T=MCCC M27001T).
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Microbiology
Qunfang Yu, Yanxiang Qi, Jinji Pu
Summary: Strain YQF-2(T) is a novel bacterium isolated from coastal sediment in Jiangsu Province, belonging to the genus Rheinheimera. It showed closest phylogenetic relationship with Rheinheimera pacifica KMM 1406(T) and can be considered as a new species named Rheinheimera lutimaris sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Victor Markus, Karina Golberg, Kerem Terali, Nazmi Ozer, Esti Kramarsky-Winter, Robert S. Marks, Ariel Kushmaro
Summary: Quorum sensing (QS) is a system of bacterial communication that regulates virulence depending on population density. In the case of multidrug-resistant bacteria like Pseudomonas aeruginosa, utilizing QS inhibitors such as furanone C-30 can effectively combat pathogenicity.
Article
Biophysics
Avigail Baruch-Leshem, Corinne Chevallard, Frederic Gobeaux, Patrick Guenoun, Jean Daillant, Philippe Fontaine, Michel Goldmann, Ariel Kushmaro, Hanna Rapaport
Summary: The order of the catalytic triad residues along amphiphilic beta-strands affects both assembly structures and catalytic activity. The amphiphilic peptide ESH achieved the highest catalytic efficiency at a concentration of 250 μM.
COLLOIDS AND SURFACES B-BIOINTERFACES
(2021)
Article
Biochemistry & Molecular Biology
Victor Markus, Orr Share, Marilou Shagan, Barak Halpern, Tal Bar, Esti Kramarsky-Winter, Kerem Terali, Nazmi Ozer, Robert S. Marks, Ariel Kushmaro, Karina Golberg
Summary: The study found that artificial sweeteners such as aspartame, sucralose, and saccharin inhibit the communication system of Gram-negative bacteria AHL, possibly affecting the balance of gut microbial community by interfering with protein folding.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Chemistry, Multidisciplinary
Feihu Wang, Hao Huang, Karin Yaniv, Ariel Kushmaro, Roy Bernstein
Summary: This study systematically investigates the self-assembly of graphene oxide and reduced graphene oxide on the surface of porous polymers and explores their potential applications for surface modification. The research shows that micropatterned graphene oxide and reduced graphene oxide with adjustable morphologies can be easily obtained on polymeric surfaces, altering the surface properties and giving the polymers various potential applications.
ADVANCED MATERIALS INTERFACES
(2022)
Article
Pharmacology & Pharmacy
Karina Golberg, Victor Markus, Bat-el Kagan, Sigalit Barzanizan, Karin Yaniv, Kerem Terali, Esti Kramarsky-Winter, Robert S. Marks, Ariel Kushmaro
Summary: Antimicrobial resistance, particularly antibacterial resistance, is a major global health problem. Current treatments for bacterial diseases are ineffective due to protective and resistant biofilm structures. This study investigates the anti-virulence activity of 3,3'-diindolylmethane (DIM), a phytochemical, and finds that it has anti-biofilm activity against major Gram-negative pathogens. Combining DIM with an antibiotic enhances its inhibition of biofilm formation. The study also reveals the molecular mechanisms underlying bacterial response to DIM, providing evidence for its potential in attenuating bacterial virulence.
Article
Chemistry, Multidisciplinary
Laura Rabbachin, Guadalupe Pinar, Irit Nir, Ariel Kushmaro, Mariela J. Pavan, Elisabeth Eitenberger, Monika Waldherr, Alexandra Graf, Katja Sterflinger
Summary: This study aimed to explore the factors involved in the degradation of petroglyph sites in the Negev desert of Israel, with a particular focus on biodegradation processes. Microbiological characterization of the samples revealed the dominance of bacterial communities with resistance to radiation and desiccation. Chemical analysis identified the composition of the stone and the dark crust, and carotenoids indicative of biological colonization were found. Microscopy and analysis confirmed patterns of weathering associated with biodeteriorative microorganisms.
APPLIED SCIENCES-BASEL
(2022)
Article
Microbiology
Lakkakula Satish, Hana Barak, Guy Keren, Galit Yehezkel, Ariel Kushmaro, Eitan Ben-Dov, Varda Kagan-Zur, Ze'ev Barak, Yaron Sitrit
Summary: This study characterizes the bacterial community associated with the desert truffle and its host plant, revealing differences in bacterial composition between fruit bodies, roots, and rhizosphere. The rhizosphere and roots had a higher bacterial species diversity compared to the fruit body. The core microbiome identified plays important roles in supporting plant growth and fruit body development.
Article
Chemistry, Medicinal
Nofar Yehuda, Levi A. Gheber, Ariel Kushmaro, Shoshana (Mails) Arad
Summary: Metal-polysaccharides have attracted significant interest due to their multifunctional bioactivities. In this study, the antimicrobial activity of Cu-PS complexes was found to be related to the spikes formed on the complex surface. The longer spikes and greater density of the monovalent complexes were found to be responsible for their superior inhibition of microbial growth and viability and biofilm formation. The spikes on the surface of the complexes were hypothesized to cause membrane perforation and cytoplasmic leakage, leading to enhanced bioluminescence accumulation in Escherichia coli. Differences in surface chemistry between the monovalent and divalent complexes were also observed, with the monovalent complexes exhibiting greater stability and spike formation.
Article
Chemistry, Multidisciplinary
Pia Ramos, Einat Chetrit, Nofar Yehuda, David Kogan, Yu Miao, Einat Nativ-Roth, Ariel Kushmaro, Ronen Berkovich, Shaily Mahendra, Moshe Gottlieb
Summary: Chitosan hydrogels are widely used in many industries for their versatility and antimicrobial properties. However, their limitations arise from poor mechanical properties and the need to use toxic compounds during fabrication. This study synthesized a soluble and antimicrobial chitosan derivative (HTCC) and compared different crosslinking agents' effects on hydrogel formation. The addition of silver nanoparticles (Ag NPs) improved the mechanical properties and the release of Ag ions effectively inhibited the growth of various bacteria.
ACS SUSTAINABLE CHEMISTRY & ENGINEERING
(2023)
Article
Multidisciplinary Sciences
Anna Willmann, Anna-Lena Trautmann, Ariel Kushmaro, Andreas Tiehm
Summary: This study investigated the degradation potential of trichloroethene (TCE) and the effectiveness of bioaugmentation in stimulating TCE degradation in groundwater samples from different contaminated sites. The results showed that the supply of oxygen stimulated aerobic degradation of TCE, and bioaugmentation effectively enhanced TCE degradation.
Review
Biochemistry & Molecular Biology
Victor Markus, Abraham Abbey Paul, Kerem Terali, Nazmi Ozer, Robert S. Marks, Karina Golberg, Ariel Kushmaro
Summary: An imbalance in gut microbiota, called dysbiosis, can affect host health and lead to diseases like inflammatory bowel disease, cancer, obesity, depression, and autism. The inhibition of bacterial quorum sensing (QS) by artificial sweeteners has been found to contribute to this dysbiosis. QS is a communication system mediated by small molecules, called autoinducers (AIs), which enable bacteria to interact and coordinate their gene expression. AIs play a role in maintaining the equilibrium of gut microbiota and interference in QS can disrupt this balance.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Infectious Diseases
Yifat Baruch, Karina Golberg, Qun Sun, Karina Yew-Hoong Gin, Robert S. Marks, Ariel Kushmaro
Summary: This study tested the effect of a natural compound called 3,3'-Diindolylmethane (DIM) on the biofilm of the oral bacterium Streptococcus mutans. The results showed that DIM was able to reduce the formation of S. mutans biofilm and decrease its durability under acidic conditions. This suggests that DIM has potential in reducing biofilm formation and preventing dental caries.
Article
Virology
Michal Liddor Naim, Yu Fu, Marilou Shagan, Itay Bar-Or, Robert Marks, Qun Sun, Rony Granek, Ariel Kushmaro
Summary: The COVID-19 pandemic has caused significant mortality and morbidity worldwide. Continuous virus mutations have led to the emergence of new variants. This study demonstrates the potential of wastewater-based epidemiology as a valuable tool for future pandemics, as it enables early detection of potential outbreaks and provides insights into variant dynamics.
Article
Microbiology
Hana Barak, Naomi Fuchs, Michal Liddor-Naim, Irit Nir, Alex Sivan, Ariel Kushmaro
Summary: Microbial dark matter (MDM), representing uncultured microorganisms, plays an important role in the diversity of microbial ecosystems. By analyzing 16S rRNA gene sequences, potential unknown bacteria were identified and a comprehensive phylogenetic tree was constructed to reveal new candidate phyla and other lineages. This study highlights the significant importance of MDM in environmental metataxonomic analyses and provides a simple method for the examination of MDM hidden behind amplicon sequencing results.
FRONTIERS IN MICROBIOLOGY
(2023)
Editorial Material
Water Resources
Esti Kramarsky-Winter, Karin Yaniv, Ariel Kushmaro
FRONTIERS IN WATER
(2023)