Article
Microbiology
Jiading Liu, Xinyu Zhang, Hao Cao, Liwei Guo, Baisuo Zhao, Xiaoxia Zhang, Yanan Wang, Haisheng Wang
Summary: A new species of Alteribacter, named Alteribacter keqinensis sp. nov., was isolated from a soda lake and identified using a polyphasic taxonomic approach. This bacterium displayed a wide range of growth conditions and possessed characteristic features of the genus Alteribacter.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Muhtar Dilmurat, Xin-Yu Hu, Tohty Dilbar, Heng-Lin Cui
Summary: A halophilic archaeal strain, designated C46(T), was isolated from an inland salt lake in Qinghai Province, PR China. The phylogenetic analysis based on 16S rRNA gene sequences showed that strain C46(T) belongs to the genus Halobaculum and is closely related to Halobaculum rubrum strain WSA2(T).
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Bing-Bing Liu, Nimaichand Salam, Manik Prabhu Narsing Rao, Shuang Cheng, Yuan-Guo Xie, Lai-You Wang, Yuan-ru Zhang, Xin-Yuan Yu, Shu-xian Guo, Wen-Jun Li
Summary: Two novel halophilic strains were isolated from a saline sediment sample in Aiding salt-lake, China. These strains, named Haloterrigena gelatinilytica, showed high salt and temperature tolerance.
ARCHIVES OF MICROBIOLOGY
(2022)
Article
Microbiology
Lei Gao, Bao-Zhu Fang, Yong-Hong Liu, Yin Huang, Shuang Wang, Hong-Chen Jiang, Wen-Jun Li
Summary: A new strain of Paracoccus, named Paracoccus salsus sp. nov., was isolated from saline lake sediment in Xinjiang Uygur Autonomous Region, China. The taxonomic position of the strain was determined using polyphasic taxonomic analysis and phylogenomic analysis. The strain exhibited distinct phenotypic, physiological and genotypic characteristics.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Zhang-Ping Wu, Ya-Ping Sun, Bei-Bei Wang, Jing Hou, Heng-Lin Cui
Summary: A filamentous cell-shaped halophilic archaeon was isolated from Aiding Salt Lake, PR China. It was found to be closely related to Halocatena pleomorpha based on phenotypic, phylogenetic, and genomic analyses. This newly discovered species was named Halocatena salina.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Elham Kazemi, Vahideh Tarhriz, Mohammad Ali Amoozegar, Mohammad Saeid Hejazi
Summary: A novel slightly halophilic bacterium, Halomonas azerbaijanica, was isolated from Urmia Lake in Iran. It thrives in high salinity, moderate temperatures, and neutral pH conditions, belonging to the genus Halomonas.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Tong-Tong Zhang, Dun Liu, Xiao-Yu Zhang, Jia-Cheng Wang, Zong-Jun Du
Summary: A moderately halophilic bacterium, designated C176(T), was isolated from Yuncheng Salt Lake in China. Phylogenetic analysis showed that strain C176(T) is closely related to Spiribacter salinus LMG 27464(T). The major fatty acids of strain C176(T) are Summed feature 8 and C-16:0, and the predominant ubiquinone is Q-8. Assessment of polyphasic taxonomy confirms strain C176(T) as a novel species of the genus Spiribacter, named Spiribacter salilacus sp. nov.
ARCHIVES OF MICROBIOLOGY
(2023)
Article
Microbiology
Chen-Xi Bao, Si-Ya Li, Yu-Jie Xin, Jing Hou, Heng-Lin Cui
Summary: Four halophilic archaeal strains, YPL8(T), SLN56(T), LT61(T), and KZCA68(T), were isolated from different regions in China. Three of these strains belong to a new species of the genus Natrinema, named Natrinema halophilum sp. nov., Natrinema salinisoli sp. nov., and Natrinema amylolyticum sp. nov. The fourth strain is a new species of the genus Haloterrigena, named Haloterrigena alkaliphila sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Microbiology
Minji Kim, Ki-Eun Lee, In-Tae Cha, Soo-Je Park
Summary: Strain M1(T) is a Gram-stain-negative, facultatively anaerobic bacterium belonging to the genus Draconibacterium, with distinct characteristics compared to other species within the genus.
CURRENT MICROBIOLOGY
(2021)
Article
Environmental Sciences
Ya-Ping Sun, Bei-Bei Wang, Zhang-Ping Wu, Xi-Wen Zheng, Jing Hou, Heng-Lin Cui
Summary: Five novel halophilic archaeal strains were isolated from coastal saline sediments and sea salt in China. They demonstrated typical morphology and growth characteristics and showed high similarities with existing species. However, based on genetic and phylogenetic analyses, it is confirmed that these strains represent five new species. This is the first report of a novel haloarchaeon isolated from a marine intertidal zone.
FRONTIERS IN MARINE SCIENCE
(2023)
Article
Microbiology
Yin Huang, Rashidin Abdugheni, Jinbiao Ma, Rui Wang, Lei Gao, Yonghong Liu, Wenjun Li, Man Cai, Li Li
Summary: A new species of Halomonas, named Halomonas flagellata sp. nov., was isolated from soil in Xinjiang, China. It is a motile bacterium with multiple flagella and shows high similarity to other Halomonas strains.
ARCHIVES OF MICROBIOLOGY
(2023)
Article
Microbiology
Alvaro S. Villalobos, Jutta Wiese, Erik Borchert, Tanja Rahn, Beate M. Slaby, Leon X. Steiner, Sven Kunzel, Cristina Dorador, Johannes F. Imhoff
Summary: Strain Llam7(T) was isolated from the hypersaline lake Salar de Llamara in the Atacama Desert in Chile. Phenotypic, chemotaxonomic, and genomic traits were studied, with the strain belonging to the family Micromonosporaceae. The strain showed differences in fatty acids, cell wall components, whole-cell sugars, and menaquinones. Phylogenetic analysis positioned strain Llam7(T) as a novel species within the genus Micromonospora, forming a distinct cluster with related strains.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Pengyu Wu, Haoran Ren, Qiuyan Zhu, Yuxia Mei, Yunxiang Liang, Zhenmin Chen
Summary: A new species of the genus Sinomicrobium, named Sinomicrobium weinanense sp. nov., was isolated from saline-alkali soil in China. This Gram-negative, facultative anaerobic, non-motile, rod-shaped strain grew optimally at 37-40 degrees C, pH 7.0, and in the presence of 0-3% (w/v) NaCl. Phylogenetic and genotypic analyses showed that it exhibited highest sequence identity with Sinomicrobium soli N-1-3-6(T), Sinomicrobium pectinilyticum 5DNS001(T), and Sinomicrobium oceani SCSIO 03483(T).
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Article
Biotechnology & Applied Microbiology
Rebekka H. Luelf, Maik Hilgarth, Matthias A. Ehrmann
Summary: Three moderately halophilic strains were isolated from a lupine-based moromi fermentation and identified as a novel species of the genus Chromohalobacter. These strains exhibited the ability to grow under various salt concentrations and temperatures, and their genome characteristics differed from other closely related strains within the genus.
SYSTEMATIC AND APPLIED MICROBIOLOGY
(2022)
Article
Microbiology
Lei Gao, Bao-Zhu Fang, Yong-Hong Liu, Yin Huang, Dan-Dan Zhang, Shuang Wang, Hong-Chen Jiang, Wen-Jun Li
Summary: A salt-tolerant bacterium, Pseudalkalibacillus salsuginis sp. nov., was isolated from saline lake sediment in Xinjiang Uygur Autonomous Region, PR China.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2022)
Review
Biochemistry & Molecular Biology
Feten Zar Kalai, Mondher Boulaaba, Farhana Ferdousi, Hiroko Isoda
Summary: Diabetes mellitus, especially type 2 (T2DM), is a global public health problem. Isorhamnetin, a plant flavonoid, has been studied for its potential anti-diabetic effects. It has been shown to reduce glucose levels, improve oxidative status, alleviate inflammation, and modulate lipid metabolism and adipocyte differentiation by regulating signaling pathways.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Biochemistry & Molecular Biology
Farhana Ferdousi, Kinji Furuya, Kazunori Sasaki, Yun-Wen Zheng, Tatsuya Oda, Hiroko Isoda
Summary: In this study, the bioactivities of squalene (SQ) derived from a microalgae were investigated in human amniotic epithelial cells (hAECs) using whole-genome DNA microarray analysis. The results showed that SQ could promote nervous system development and neurotransmitter modulation in hAECs, and several adipose tissue-specific genes and functions were also enriched. Additionally, SQ was found to have the potential therapeutic effects for nervous system- and metabolism-related diseases.
Article
Cell Biology
Meriem Bejaoui, Aprill Kee Oliva, May Sin Ke, Farhana Ferdousi, Hiroko Isoda
Summary: The study demonstrated that dermal papilla cells grown in 3D hanging spheroids have a significant impact on hair growth-related pathways and cell adhesion molecules. DNA microarray analysis was used to compare the effects of different drugs on DPCs, showing that the 3D system enhances the effects of these drugs on hair growth.
Article
Microbiology
Qi Liu, Zichen He, Takeshi Naganuma, Ryosuke Nakai, Luz Maria Rodriguez, Rafael Carreno, Franco Urbani
Summary: This study investigated the microbial diversity of opal speleothems from a silicate cave in Guiana Highlands and found that the microbial composition in silicate caves is similar to that in limestone and other silicate caves. Additionally, the study inferred metabolic features and found that membrane transport and amino acid metabolism may play important roles in the formation and weathering of silicate speleothems.
Article
Microbiology
Zichen He, Takeshi Naganuma, Ryosuke Nakai, Satoshi Imura, Megumu Tsujimoto, Peter Convey
Summary: This study compared the bacterial floras and potential metabolism of rock tripe lichens from two distinct Antarctic biological regions. The results showed clear differences in bacterial communities between the two regions and suggested that the sampling area's climate may influence the metabolism of the lichen-associated bacteria.
Review
Microbiology
Zichen He, Takeshi Naganuma
Summary: Lichens are symbiotic systems consisting of fungal and algal symbionts. The plasticity in the combination of fungal and algal species contributes to the worldwide distribution of lichens, while the association between non-cyanobacterial bacteria and lichens has attracted attention.
Article
Microbiology
Akio Ueno, Satoshi Tamazawa, Shuji Tamamura, Takuma Murakami, Tamotsu Kiyama, Hidenori Inomata, Noritaka Aramaki, Kunihiko Yoshida, Shinji Yamaguchi, Hideo Aoyama, Takeshi Naganuma, Toshifumi Igarashi
Summary: This study reported the effective conversion of chemically solubilized lignite into methane using methanogenic consortia. Adding pulverized lignite as conductive material significantly increased methane production by approximately 50-fold. This method provides an effective utilization of the neglected subterranean lignite resource.
Article
Biochemistry & Molecular Biology
Meryem Bouhoute, Yhiya Amen, Meriem Bejaoui, Aprill Kee Oliva Mizushima, Kuniyoshi Shimizu, Hiroko Isoda
Summary: This study investigates the anti-melanogenic effect of a compound called Butyroside D and its underlying mechanism. The results show that Butyroside D downregulates the cAMP, Wnt/beta-catenin, and MAPK signaling pathways, leading to the repression of melanin biosynthesis. Furthermore, Butyroside D inhibits the activation of the cAMP pathway mediated through alpha-melanocyte-stimulating hormone (alpha-MSH) and MC1R, confirming its anti-melanogenic effect on human epidermal melanocytes (HEM) cells.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Biochemistry & Molecular Biology
Kengo Iwata, Farhana Ferdousi, Yoshinobu Arai, Hiroko Isoda
Summary: The polyphenols found in sugarcane have the potential to promote neuronal differentiation and astrocytic maturation. These compounds work synergistically to activate key genes and regulate cell cycle, leading to enhanced neuronal differentiation and mitochondrial activity in astrocytes.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Environmental Sciences
Sahar Karray, Justine Marchand, Alain Geffard, Tarek Rebai, Francoise Denis, Benoit Chenais, Amel Hamza-Chaffai
Summary: This study focused on evaluating the responses of the cockle, Cerastoderma glaucum, to metal exposures at different contamination levels in the Gulf of Gabes. The study examined the physiological state, bioaccumulation of metals, histological changes in gametogenesis and sexual maturity, and gene expression of key enzymes and proteins involved in responses to environmental stressors. Results showed a decrease in physiological status, consistent bioaccumulation of metals with contamination gradient, minimal differences in reproductive cycle, and varied patterns of gene expression. Overall, these findings suggest that measures of physiological condition, sex ratios, and gene expression could serve as biomarkers for assessing metal impacts on cockles, but further proteomics studies are needed.
ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY
(2023)
Article
Biochemistry & Molecular Biology
Farhana Ferdousi, Kazunori Sasaki, Satoshi Fukumitsu, Hidetoshi Kuwata, Mitsutoshi Nakajima, Hiroko Isoda
Summary: In this study, an untargeted whole-genome transcriptomics analysis was conducted to investigate the effects of carnosic acid (CA) on human amniotic epithelial stem cells (hAESCs). The results showed that CA induced mesoderm-lineage-specific differentiation in hAESCs, particularly in cardiovascular and adipose tissues. Further analysis identified potential molecular targets and upstream regulators of CA in a tissue-specific manner. Overall, this study provides a comprehensive understanding of the molecular mechanisms of CA.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Biochemistry & Molecular Biology
Rui Wang, Munkhzul Ganbold, Farhana Ferdousi, Kenichi Tominaga, Hiroko Isoda
Summary: A rare natural compound called oleacein found in unfiltered extra virgin olive oil has been shown to have anti-inflammatory and anti-obesity properties. It can inhibit lipid formation, modulate lipid and glucose metabolism, and enhance anti-inflammatory properties in adipocytes, suggesting its potential application in the management of metabolic disorders.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Biochemistry & Molecular Biology
Michitaka Fujiwara, Farhana Ferdousi, Hiroko Isoda
Summary: With the progression of an aging society, cognitive aging has become an urgent concern. This study uses the senescence-accelerated mouse-prone 8 (SAMP8) model to investigate molecular changes in the brain cortex, identifying key functional alterations and candidate genes associated with brain aging, as well as pivotal hub genes involved in these functional domains.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Nutrition & Dietetics
Jieun Yoon, Kazunori Sasaki, Iku Nishimura, Haruna Hashimoto, Tomohiro Okura, Hiroko Isoda
Summary: This study examined the effects of desert olive tree pearls (DOTPs) on the cognitive function of middle-aged and older adults. Results showed that DOTPs significantly improved complex attention and alleviated cognitive problems faced by middle-aged and older adults in Japan.
Article
Nutrition & Dietetics
Shinji Kondo, Farhana Ferdousi, Jinchang Zhao, Sofya Suidasari, Miki Yokozawa, Ken Yamauchi, Ken-ichi Tominaga, Hiroko Isoda
Summary: Olive leaf extract has shown potential as a hematinic agent by increasing red blood cell count and hemoglobin levels. It also does not have significant adverse effects on liver and kidney functions. Oleuropein and oleuroside have been identified as the active components in olive leaf extract for inducing erythroid differentiation.