Genome-wide identification and comparative analysis of grafting-responsive mRNA in watermelon grafted onto bottle gourd and squash rootstocks by high-throughput sequencing

Grafting Triggers Differential Responses between Scion and Rootstock

(2015) Anita Kumari et al.   PLoS One

Grafting with rootstocks induces extensive transcriptional re-programming in the shoot apical meristem of grapevine

(2013) Sarah Cookson et al.   BMC PLANT BIOLOGY

Contributions of roots and rootstocks to sustainable, intensified crop production

(2013) Peter J. Gregory et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-Wide Identification and Comparative Analysis of Conserved and Novel MicroRNAs in Grafted Watermelon by High-Throughput Sequencing

(2013) Na Liu et al.   PLoS One

Rootstock-regulated gene expression patterns associated with fire blight resistance in apple

(2012) Philip J Jensen et al.   BMC GENOMICS

Deep-sequencing transcriptome analysis of chilling tolerance mechanisms of a subnival alpine plant, Chorispora bungeana

(2012) Zhiguang Zhao et al.   BMC PLANT BIOLOGY

Structure and regulatory networks of WD40 protein in plants

(2012) Awdhesh Kumar Mishra et al.   JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY

Comparative Transcriptomic Analysis of Salt Adaptation in Roots of Contrasting Medicago truncatula Genotypes

(2012) Ons Zahaf et al.   Molecular Plant

Activation of rice Yellow Stripe1-Like 16 (OsYSL16) enhances iron efficiency

(2012) Sichul Lee et al.   MOLECULES AND CELLS

A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae

(2012) Intawat Nookaew et al.   NUCLEIC ACIDS RESEARCH

Genome expression profile analysis reveals important transcripts in maize roots responding to the stress of heavy metal Pb

(2012) Yaou Shen et al.   PHYSIOLOGIA PLANTARUM

YSL16 Is a Phloem-Localized Transporter of the Copper-Nicotianamine Complex That Is Responsible for Copper Distribution in Rice

(2012) L. Zheng et al.   PLANT CELL

DEXH Box RNA Helicase-Mediated Mitochondrial Reactive Oxygen Species Production in Arabidopsis Mediates Crosstalk between Abscisic Acid and Auxin Signaling

(2012) J. He et al.   PLANT CELL

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Abscisic Acid: Emergence of a Core Signaling Network

(2010) Sean R. Cutler et al.   Annual Review of Plant Biology

ABA overly-sensitive 5 (ABO5), encoding a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3, is involved in the abscisic acid response in Arabidopsis

(2010) Yue Liu et al.   PLANT JOURNAL

Impact of grafting on product quality of fruit vegetables

(2010) Youssef Rouphael et al.   SCIENTIA HORTICULTURAE

Amelioration of heavy metal and nutrient stress in fruit vegetables by grafting

(2010) Dimitrios Savvas et al.   SCIENTIA HORTICULTURAE

Hormonal signaling in rootstock–scion interactions

(2010) B. Aloni et al.   SCIENTIA HORTICULTURAE

Role of grafting in vegetable crops grown under saline conditions

(2010) Giuseppe Colla et al.   SCIENTIA HORTICULTURAE

Current status of vegetable grafting: Diffusion, grafting techniques, automation

(2010) Jung-Myung Lee et al.   SCIENTIA HORTICULTURAE

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

RNA-Seq—quantitative measurement of expression through massively parallel RNA-sequencing

(2009) Brian T. Wilhelm et al.   METHODS

Abiotic Stress Tolerance: From Gene Discovery in Model Organisms to Crop Improvement

(2009) Ray Bressan et al.   Molecular Plant

In vitro reconstitution of an abscisic acid signalling pathway

(2009) Hiroaki Fujii et al.   NATURE

Structural basis of abscisic acid signalling

(2009) Ken-ichi Miyazono et al.   NATURE

Cucurbit Grafting

(2008) Angela R. Davis et al.   CRITICAL REVIEWS IN PLANT SCIENCES

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH

Applications of next-generation sequencing technologies in functional genomics

(2008) Olena Morozova et al.   GENOMICS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

The impact of next-generation sequencing technology on genetics

(2008) Elaine R. Mardis   TRENDS IN GENETICS