Molecular operational taxonomic units as approximations of species in the light of evolutionary models and empirical data from Fungi

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Will different OTU delineation methods change interpretation of arbuscular mycorrhizal fungal community patterns?

(2014) Ylva Lekberg et al.   NEW PHYTOLOGIST

GenBank

(2014) Dennis A. Benson et al.   NUCLEIC ACIDS RESEARCH

A Preliminary Framework for DNA Barcoding, Incorporating the Multispecies Coalescent

(2014) Mark Dowton et al.   SYSTEMATIC BIOLOGY

A general species delimitation method with applications to phylogenetic placements

(2013) Jiajie Zhang et al.   BIOINFORMATICS

Multiple ITS Haplotypes in the Genome of the Lichenized Basidiomycete Cora inversa (Hygrophoraceae): Fact or Artifact?

(2013) Robert Lücking et al.   JOURNAL OF MOLECULAR EVOLUTION

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Delimiting Species Using Single-Locus Data and the Generalized Mixed Yule Coalescent Approach: A Revised Method and Evaluation on Simulated Data Sets

(2013) Tomochika Fujisawa et al.   SYSTEMATIC BIOLOGY

Employing 454 amplicon pyrosequencing to reveal intragenomic divergence in the internal transcribed spacer rDNA region in fungi

(2013) Daniel L. Lindner et al.   Ecology and Evolution

Culture-Free Survey Reveals Diverse and Distinctive Fungal Communities Associated with Developing Figs (Ficus spp.) in Panama

(2012) Ellen O. Martinson et al.   MICROBIAL ECOLOGY

Towards next-generation biodiversity assessment using DNA metabarcoding

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Effect of Geographical Scale of Sampling on DNA Barcoding

(2012) J. Bergsten et al.   SYSTEMATIC BIOLOGY

Lyophyllum shimeji, a species associated with lichen pine forest in northern Fennoscandia

(2011) Ellen Larsson et al.   MYCOSCIENCE

Asynchronous origins of ectomycorrhizal clades of Agaricales

(2011) M. Ryberg et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Branch Lengths on Birth–Death Trees and the Expected Loss of Phylogenetic Diversity

(2011) Arne Mooers et al.   SYSTEMATIC BIOLOGY

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Fungal ecology catches fire

(2009) David S. Hibbett et al.   NEW PHYTOLOGIST

Using heterozygosity to estimate a percentage DNA sequence similarity for environmental species’ delimitation across basidiomycete fungi

(2009) Karen W. Hughes et al.   NEW PHYTOLOGIST

The Last Glacial Maximum

(2009) P. U. Clark et al.   SCIENCE

Evidence for Ecological Speciation and Its Alternative

(2009) D. Schluter   SCIENCE

Mining metadata from unidentified ITS sequences in GenBank: A case study in Inocybe (Basidiomycota)

(2008) Martin Ryberg et al.   BMC EVOLUTIONARY BIOLOGY

IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING?

(2008) Scott V. Edwards   EVOLUTION