Duplication and Adaptive Evolution of a Key Centromeric Protein inMimulus, a Genus with Female Meiotic Drive

Centromere-associated meiotic drive and female fitness variation inMimulus

(2015) Lila Fishman et al.   EVOLUTION

Centromeres Off the Hook: Massive Changes in Centromere Size and Structure Following Duplication ofCenH3Gene inFabeaeSpecies

(2015) Pavel Neumann et al.   MOLECULAR BIOLOGY AND EVOLUTION

Naturally Occurring Differences in CENH3 Affect Chromosome Segregation in Zygotic Mitosis of Hybrids

(2015) Shamoni Maheshwari et al.   PLoS Genetics

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Centromere Strength Provides the Cell Biological Basis for Meiotic Drive and Karyotype Evolution in Mice

(2014) Lukáš Chmátal et al.   CURRENT BIOLOGY

Comparative linkage maps suggest that fission, not polyploidy, underlies near-doubling of chromosome number within monkeyflowers (Mimulus; Phrymaceae)

(2014) L Fishman et al.   HEREDITY

Gene expression plasticity resulting from parental leaf damage inMimulus guttatus

(2014) Jack M. Colicchio et al.   NEW PHYTOLOGIST

Characterization of twoCENH3genes and their roles in wheat evolution

(2014) Jing Yuan et al.   NEW PHYTOLOGIST

Recurrent loss of CenH3 is associated with independent transitions to holocentricity in insects

(2014) Ines A Drinnenberg et al.   eLife

Nothing in Genetics Makes Sense Except in Light of Genomic Conflict

(2013) William R. Rice   Annual Review of Ecology Evolution and Systematics

The MaSuRCA genome assembler

(2013) Aleksey V. Zimin et al.   BIOINFORMATICS

Three Potato Centromeres Are Associated with Distinct Haplotypes with or Without Megabase-Sized Satellite Repeat Arrays

(2013) L. Wang et al.   GENETICS

The Standing Pool of Genomic Structural Variation in a Natural Population of Mimulus guttatus

(2013) Lex E. Flagel et al.   Genome Biology and Evolution

Fine-scale variation in meiotic recombination in Mimulus inferred from population shotgun sequencing

(2013) U. Hellsten et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

(2013) Daniël P Melters et al.   GENOME BIOLOGY

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Evidence for Centromere Drive in the Holocentric Chromosomes of Caenorhabditis

(2012) František Zedek et al.   PLoS One

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Stretching the Rules: Monocentric Chromosomes with Multiple Centromere Domains

(2012) Pavel Neumann et al.   PLoS Genetics

Absence of Positive Selection on Centromeric Histones in Tetrahymena Suggests Unsuppressed Centromere-Drive in Lineages Lacking Male Meiosis

(2011) Nels C. Elde et al.   JOURNAL OF MOLECULAR EVOLUTION

An Improved Likelihood Ratio Test for Detecting Site-Specific Functional Divergence among Clades of Protein-Coding Genes

(2011) Cameron J. Weadick et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Crystal structure of the human centromeric nucleosome containing CENP-A

(2011) Hiroaki Tachiwana et al.   NATURE

Knockdown of CENH3 in Arabidopsis reduces mitotic divisions and causes sterility by disturbed meiotic chromosome segregation

(2011) Inna Lermontova et al.   PLANT JOURNAL

Change of Positive Selection Pressure on HIV-1 Envelope Gene Inferred by Early and Recent Samples

(2011) Izumi Yoshida et al.   PLoS One

Loss of centromeric histone H3 (CENH3) from centromeres precedes uniparental chromosome elimination in interspecific barley hybrids

(2011) M. Sanei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adaptive Evolution of Foundation Kinetochore Proteins in Primates

(2010) Mary G. Schueler et al.   MOLECULAR BIOLOGY AND EVOLUTION

The evolution of gene duplications: classifying and distinguishing between models

(2010) Hideki Innan et al.   NATURE REVIEWS GENETICS

Recognition of A. thaliana centromeres by heterologous CENH3 requires high similarity to the endogenous protein

(2010) Izabel C. R. Moraes et al.   PLANT MOLECULAR BIOLOGY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Major Evolutionary Transitions in Centromere Complexity

(2009) Harmit S. Malik et al.   CELL

Distinguishing Among Evolutionary Models for the Maintenance of Gene Duplicates

(2009) M. W. Hahn   JOURNAL OF HEREDITY

Lineage-Specific Adaptive Evolution of the Centromeric Protein CENH3 in Diploid and Allotetraploid Oryza Species

(2009) C. D. Hirsch et al.   MOLECULAR BIOLOGY AND EVOLUTION

Emerging roles for centromeres in meiosis I chromosome segregation

(2008) Gloria A. Brar et al.   NATURE REVIEWS GENETICS

Centromere-Associated Female Meiotic Drive Entails Male Fitness Costs in Monkeyflowers

(2008) L. Fishman et al.   SCIENCE