Plant Host Species and Geographic Distance Affect the Structure of Aboveground Fungal Symbiont Communities, and Environmental Filtering Affects Belowground Communities in a Coastal Dune Ecosystem

The community ecology of pathogens: coinfection, coexistence and community composition

(2015) Eric W. Seabloom et al.   ECOLOGY LETTERS

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

A continental view of pine-associated ectomycorrhizal fungal spore banks: a quiescent functional guild with a strong biogeographic pattern

(2015) Sydney I. Glassman et al.   NEW PHYTOLOGIST

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The role of stochasticity differs in the assembly of soil- and root-associated fungal communities

(2015) Sarah Beck et al.   SOIL BIOLOGY & BIOCHEMISTRY

Mobyle SNAP Workbench: a web-based analysis portal for population genetics and evolutionary genomics

(2014) James T. Monacell et al.   BIOINFORMATICS

Environmental filtering affects soil fungal community composition more than dispersal limitation at regional scales

(2014) Stephanie N. Kivlin et al.   Fungal Ecology

Communities of fungal endophytes in tropical forest grasses: highly diverse host- and habitat generalists characterized by strong spatial structure

(2014) K. Lindsay Higgins et al.   Fungal Ecology

Leaf and Root-Associated Fungal Assemblages Do Not Follow Similar Elevational Diversity Patterns

(2014) Aurore Coince et al.   PLoS One

Endemism and functional convergence across the North American soil mycobiome

(2014) J. M. Talbot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The world within: Quantifying the determinants and outcomes of a host's microbiome

(2013) Elizabeth T. Borer et al.   BASIC AND APPLIED ECOLOGY

Defensive mutualisms: do microbial interactions within hosts drive the evolution of defensive traits?

(2013) Georgiana May et al.   FUNCTIONAL ECOLOGY

Arabidopsis thaliana model system reveals a continuum of responses to root endophyte colonization

(2013) Keerthi G. Mandyam et al.   Fungal Biology

Arctic root-associated fungal community composition reflects environmental filtering

(2013) Rakel Blaalid et al.   MOLECULAR ECOLOGY

Low host specificity of root-associated fungi at an Arctic site

(2013) Synnøve Botnen et al.   MOLECULAR ECOLOGY

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

(2013) V. K. Ridaura et al.   SCIENCE

Host and geographic structure of endophytic and endolichenic fungi at a continental scale

(2012) Jana M. U'Ren et al.   AMERICAN JOURNAL OF BOTANY

From Animalcules to an Ecosystem: Application of Ecological Concepts to the Human Microbiome

(2012) Noah Fierer et al.   Annual Review of Ecology Evolution and Systematics

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Biophysical feedback mediates effects of invasive grasses on coastal dune shape

(2012) Phoebe L. Zarnetske et al.   ECOLOGY

Invasive grasses, climate change, and exposure to storm-wave overtopping in coastal dune ecosystems

(2012) Eric W. Seabloom et al.   GLOBAL CHANGE BIOLOGY

Towards global patterns in the diversity and community structure of ectomycorrhizal fungi

(2012) LEHO TEDERSOO et al.   MOLECULAR ECOLOGY

Thermophilic fungi in an aridland ecosystem

(2012) A. J. Powell et al.   MYCOLOGIA

Decomposing dispersal limitation: limits on fecundity or seed distribution?

(2011) John Terborgh et al.   JOURNAL OF ECOLOGY

A meta-analysis of plant responses to dark septate root endophytes

(2011) K. K. Newsham   NEW PHYTOLOGIST

Subtle differences in two non-native congeneric beach grasses significantly affect their colonization, spread, and impact

(2011) Sally D. Hacker et al.   OIKOS

Global diversity and distribution of arbuscular mycorrhizal fungi

(2011) Stephanie N. Kivlin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Exploring the evolutionary ecology of fungal endophytes in agricultural systems: using functional traits to reveal mechanisms in community processes

(2010) Megan Saunders et al.   Evolutionary Applications

Root endophytes along a primary succession gradient in northern Finland

(2010) M. V. Tejesvi et al.   FUNGAL DIVERSITY

An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

(2010) R. Henrik Nilsson et al.   Fungal Ecology

Isolation and morphological and metabolic characterization of common endophytes in annually burned tallgrass prairie

(2010) Keerthi Mandyam et al.   MYCOLOGIA

Conceptual Synthesis in Community Ecology

(2010) Mark Vellend   QUARTERLY REVIEW OF BIOLOGY

Non-target effects of invasive species management: beachgrass, birds, and bulldozers in coastal dunes

(2010) Phoebe L. Zarnetske et al.   Ecosphere

Variation in Endophyte Symbiosis, Herbivory and Drought Tolerance of Ammophila breviligulata Populations in the Great Lakes Region

(2009) Sarah M. Emery et al.   AMERICAN MIDLAND NATURALIST

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Potential link between plant and fungal distributions in a dipterocarp rainforest: community and phylogenetic structure of tropical ectomycorrhizal fungi across a plant and soil ecotone

(2009) Kabir G. Peay et al.   NEW PHYTOLOGIST

Fungal endophytes: diversity and functional roles

(2009) R. J. Rodriguez et al.   NEW PHYTOLOGIST

Bacterial Community Variation in Human Body Habitats Across Space and Time

(2009) E. K. Costello et al.   SCIENCE

Stress tolerance in plants via habitat-adapted symbiosis

(2008) Rusty J Rodriguez et al.   ISME Journal

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH