Characterization of MHC class II B polymorphism in bottlenecked New Zealand saddlebacks reveals low levels of genetic diversity

Characterization and 454 pyrosequencing of Major Histocompatibility Complex class I genes in the great tit reveal complexity in a passerine system

(2012) Irem Sepil et al.   BMC EVOLUTIONARY BIOLOGY

454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher

(2011) Magdalena Zagalska-Neubauer et al.   BMC EVOLUTIONARY BIOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Disentangling the roles of natural selection and genetic drift in shaping variation at MHC immunity genes

(2011) JOLENE T. SUTTON et al.   MOLECULAR ECOLOGY

Chelex without boiling, a rapid and easy technique to obtain stable amplifiable DNA from small amounts of ethanol-stored spiders

(2011) JULIANE CASQUET et al.   Molecular Ecology Resources

Evaluation of two approaches to genotyping major histocompatibility complex class I in a passerine-CE-SSCP and 454 pyrosequencing

(2011) MARTA PROMEROVÁ et al.   Molecular Ecology Resources

An integrated semiconductor device enabling non-optical genome sequencing

(2011) Jonathan M. Rothberg et al.   NATURE

Concurrent avian malaria and avipox virus infection in translocated South Island saddlebacks (Philesturnus carunculatus carunculatus)

(2011) MR Alley et al.   NEW ZEALAND VETERINARY JOURNAL

Variation in MHC genotypes in two populations of house sparrow (Passer domesticus) with different population histories

(2011) Åsa Alexandra Borg et al.   Ecology and Evolution

SESAME (SEquence Sorter & AMplicon Explorer): genotyping based on high-throughput multiplex amplicon sequencing

(2010) Emese Meglécz et al.   BIOINFORMATICS

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

(2010) W. Delport et al.   BIOINFORMATICS

Manipulation of FASTQ data with Galaxy

(2010) D. Blankenberg et al.   BIOINFORMATICS

A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies

(2010) Maxime Galan et al.   BMC GENOMICS

Ancestral polymorphism in exon 2 of bluethroat (Luscinia svecica) MHC class II B genes

(2010) J. A. ANMARKRUD et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Extensive MHC Class II B Gene Duplication in a Passerine, the Common Yellowthroat (Geothlypis trichas)

(2010) Jennifer L. Bollmer et al.   JOURNAL OF HEREDITY

Adaptive Divergence of Ancient Gene Duplicates in the Avian MHC Class II  

(2010) R. Burri et al.   MOLECULAR BIOLOGY AND EVOLUTION

How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings

(2010) L. G. Spurgin et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Rapid recovery of an island population of the threatened South Island Saddleback Philesturnus c. carunculatus after a pathogen outbreak

(2009) KATRINA A. HALE et al.   BIRD CONSERVATION INTERNATIONAL

Mhc class II diversity and balancing selection in greater prairie-chickens

(2009) John A. Eimes et al.   GENETICA

New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system

(2009) WIESŁAW BABIK et al.   Molecular Ecology Resources

Simple approach to reduce PCR artefact formation leads to reliable genotyping of MHC and other highly polymorphic loci — Implications for evolutionary analysis

(2008) Tobias L. Lenz et al.   GENE

Evolutionary Patterns of MHC Class II B in Owls and Their Implications for the Understanding of Avian MHC Evolution

(2008) Reto Burri et al.   MOLECULAR BIOLOGY AND EVOLUTION

Parallel tagged sequencing on the 454 platform

(2008) Matthias Meyer et al.   Nature Protocols