Review
Biochemical Research Methods
Anqiang Jia, Ling Xu, Yi Wang
Summary: In this review, various Venn diagram generators and application tools are compared based on their ability to generate high-quality diagrams, handle maximum datasets, input and output formats, and picture beautification parameters. The functional characteristics of popular tools are also briefly described.
BRIEFINGS IN BIOINFORMATICS
(2021)
Article
Computer Science, Software Engineering
Rebecca Kehlbeck, Jochen Goertler, Yunhai Wang, Oliver Deussen
Summary: In this study, we propose a fast two-step layout technique for creating comprehensible visualizations of highly overlapping set-typed data. Our method conforms to established form guidelines for Euler diagrams and generates simple, smooth Euler diagrams while maintaining semantics. Compared to previous methods, our algorithm has the advantage of providing a fallback solution that is not well-formed but still well-matched when the data cannot be represented by simple diagrams.
IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
(2022)
Article
Computer Science, Artificial Intelligence
Andrew Blake, Gem Stapleton, Peter Rodgers, Anestis Touloumis
Summary: The study shows that free rides and observational advantages in visualizations can significantly improve task performance for Euler and linear diagrams, with observational advantages showing benefits over text for Venn diagrams. More research is needed to determine when free rides are beneficial, and it is suggested that observational advantages may better explain the cognitive advantages of diagrams over text.
JOURNAL OF LOGIC LANGUAGE AND INFORMATION
(2021)
Article
Biochemical Research Methods
Sunil Nagpal, Bhusan K. Kuntal, Sharmila S. Mande
Summary: This study introduces a new JavaScript framework (NetSets.js) that integrates Venn diagrams and network diagrams into a single application for easier comparison of datasets and network visualization. The tool also allows connection to the Cytoscape desktop application. The utility of the tool is demonstrated using real-world biological networks.
Article
Computer Science, Software Engineering
Daniel Reimann, Andre Schulz, Nilam Ram, Robert Gaschler
Summary: Node-link diagrams allow for visual assessment of homophily by identifying and evaluating the relative number of intra-cluster and inter-cluster links. Our online experiment demonstrates that a design utilizing link type encoded edge color leads to more accurate perception of homophily compared to a design with same-color edges.
IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
(2023)
Article
Biochemical Research Methods
Jin Xu, Jessie Jiang, Herbert M. Sauro
Summary: SBMLDiagrams is a new Python package that allows users to add and retrieve layout and render information in SBML. It uses skia-python to support diagram rendering, allowing export to common image formats.
Article
Genetics & Heredity
Chun-Hui Gao, Guangchuang Yu, Peng Cai
Summary: ggVennDiagram is an R package for automatically generating high-quality Venn diagrams with two to seven sets, based on ggplot2. It integrates the advantages of existing packages, allows satisfactory results with minimal configurations, and enables high customization of every Venn plot sub-element.
FRONTIERS IN GENETICS
(2021)
Proceedings Paper
Computer Science, Artificial Intelligence
Sven Linker
Summary: This paper introduces a proof system based on Natural Deduction for intuitionistic Euler-Venn diagrams, which involves gradually decomposing diagrams for proofs. While this style is easy to automate, it is less intuitive for human reasoners, hence the choice of Natural Deduction to make the system more user-friendly and understandable.
DIAGRAMMATIC REPRESENTATION AND INFERENCE, DIAGRAMS 2021
(2021)
Article
Computer Science, Software Engineering
Cedric Krause, Shivam Agarwal, Michael Burch, Fabian Beck
Summary: In this paper, a double tree visualization approach for event sequence analysis is introduced. The approach allows analysts to better understand event data by visualizing sequences before and after a certain event of interest. The integration of double trees and category-based comparison provides users with interactive tools to compare events and sequences. The general applicability of the approach is demonstrated through three application examples.
COMPUTER GRAPHICS FORUM
(2023)
Article
Computer Science, Software Engineering
Benedikt Mayer, Nastasja Steinhauer, Bernhard Preim, Monique Meuschke
Summary: Large-scale issues such as the COVID-19 pandemic, the war against Ukraine, and climate change have brought attention to visual storytelling with data in online journalism, confirming its effectiveness and relevance. However, there is limited research on interactive visual data stories with a spatio-temporal context. This study proposes a design space and analyzes 130 collected web-based visual data stories to understand common techniques used in conveying complex information in a comprehensible way.
COMPUTER GRAPHICS FORUM
(2023)
Article
Computer Science, Software Engineering
Stefanie Zollmann, Tobias Langlotz, Raphael Grasset, Wei Hong Lo, Shohei Mori, Holger Regenbrecht
Summary: This article provides a taxonomy of existing works on visualization techniques in Augmented Reality, aiming to give researchers and developers without an in-depth background in AR the necessary information to apply visualization techniques in AR environments successfully.
IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
(2021)
Article
Computer Science, Theory & Methods
Hugo B. Lima, Carlos G. R. Dos Santos, Bianchi S. Meiguins
Summary: Music Information Research (MIR) involves modeling and understanding music through visualizations. Papers on music visualization are categorized based on input features, visualized aspects, InfoVis techniques, interaction provided, and user evaluations, offering opportunities for identifying trends and new research directions in the MIR and InfoVis community.
ACM COMPUTING SURVEYS
(2021)
Review
Chemistry, Analytical
Maxim Kolomeets, Vasily Desnitsky, Igor Kotenko, Andrey Chechulin
Summary: Currently, there is a growing development in human-machine interaction and visualization methods. The need to find effective visualization models for different data types and develop automation tools for selecting the best model is present in various fields of knowledge and technology. While there are many data visualization tools available, presenting interconnected data, such as networks, remains a challenge. In addition to graphs, alternative visualization models have the potential to expand analyst's capabilities and provide alternative solutions.
Article
Computer Science, Software Engineering
Markus Wallinger, Daniel Archambault, David Auber, Martin Noellenburg, Jaakko Peltonen
Summary: This paper presents a new Edge-Path bundling approach that increases the computational speed without reducing the quality of the bundling. The approach processes biconnected components separately and exploits the relationship between Edge-Path bundling and graph spanners. Experimental results show that the new approach is 5-256 times faster than Edge-Path bundling, bringing its practical running time more in line with traditional edge bundling algorithms.
COMPUTER GRAPHICS FORUM
(2023)
Article
Philosophy
Amirouche Moktefi, Jens Lemanski
Summary: This paper argues that various currents, ideas, and problems in 19th-century logic inspired John Venn to create his famous logic diagrams. Venn's solution to the problem of uncertainty in syllogistic reasoning, using Boolean algebra instead of Euler diagrams, is what led to the development of the Venn Diagram as we know it today.
Article
Computer Science, Cybernetics
Peter Rodgers, Gem Stapleton, Peter Chapman
ACM TRANSACTIONS ON COMPUTER-HUMAN INTERACTION
(2015)
Article
Computer Science, Software Engineering
Bilal Alsallakh, Luana Micallef, Wolfgang Aigner, Helwig Hauser, Silvia Miksch, Peter Rodgers
COMPUTER GRAPHICS FORUM
(2016)
Article
Computer Science, Artificial Intelligence
Daniel Chivers, Peter Rodgers
INTERNATIONAL JOURNAL OF SOFTWARE ENGINEERING AND KNOWLEDGE ENGINEERING
(2015)
Article
Computer Science, Artificial Intelligence
Gem Stapleton, Beryl Plimmer, Aidan Delaney, Peter Rodgers
ACM TRANSACTIONS ON INTELLIGENT SYSTEMS AND TECHNOLOGY
(2015)
Article
Computer Science, Information Systems
Peter Rodgers, Gem Stapleton, Bilal Alsallakh, Luana Michallef, Rob Baker, Simon Thompson
INFORMATION SCIENCES
(2016)
Article
Computer Science, Information Systems
Andrew Blake, Gem Stapleton, Peter Rodgers, John Howse
INFORMATION SCIENCES
(2016)
Article
Computer Science, Software Engineering
Jean Flower, Gem Stapleton, Peter Rodgers
JOURNAL OF VISUAL LANGUAGES AND COMPUTING
(2014)
Article
Computer Science, Software Engineering
Peter Rodgers
JOURNAL OF VISUAL LANGUAGES AND COMPUTING
(2014)
Editorial Material
Computer Science, Software Engineering
Beryl Plimmer, Peter Rodgers, Gem Stapleton
JOURNAL OF VISUAL LANGUAGES AND COMPUTING
(2014)
Article
Computer Science, Software Engineering
Fadi K. Dib, Peter Rodgers
JOURNAL OF VISUAL LANGUAGES AND COMPUTING
(2014)
Article
Computer Science, Software Engineering
Luana Micallef, Peter Rodgers
JOURNAL OF VISUAL LANGUAGES AND COMPUTING
(2014)
Article
Logic
Jim Burton, John Howse
LOGICA UNIVERSALIS
(2017)
Proceedings Paper
Computer Science, Artificial Intelligence
Eisa Alharbi, John Howse, Gem Stapleton, Ali Hamie
DIAGRAMMATIC REPRESENTATION AND INFERENCE, DIAGRAMS 2016
(2016)
Proceedings Paper
Computer Science, Artificial Intelligence
Mohanad Alqadah, Gem Stapleton, John Howse, Peter Chapman
DIAGRAMMATIC REPRESENTATION AND INFERENCE, DIAGRAMS 2016
(2016)