Global human tissue profiling and protein network analysis reveals distinct levels of transcriptional germline-specificity and identifies target genes for male infertility

Genome-wide Association Study Identifies Candidate Genes for Male Fertility Traits in Humans

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Restricted Expression of Ovol2/MOVO in XY Body of Mouse Spermatocytes at the Pachytene Stage

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Genetic causes of spermatogenic failure

(2011) Annelien Massart et al.   ASIAN JOURNAL OF ANDROLOGY

DREME: motif discovery in transcription factor ChIP-seq data

(2011) Timothy L. Bailey   BIOINFORMATICS

Interactome Networks and Human Disease

(2011) Marc Vidal et al.   CELL

A-MYB (MYBL1) transcription factor is a master regulator of male meiosis

(2011) E. Bolcun-Filas et al.   DEVELOPMENT

The Human Protein Atlas as a proteomic resource for biomarker discovery

(2011) F. Pontén et al.   JOURNAL OF INTERNAL MEDICINE

Exome sequencing: a transformative technology

(2011) Andrew B Singleton   LANCET NEUROLOGY

Performance comparison of whole-genome sequencing platforms

(2011) Hugo Y K Lam et al.   NATURE BIOTECHNOLOGY

MINT, the molecular interaction database: 2012 update

(2011) Luana Licata et al.   NUCLEIC ACIDS RESEARCH

The IntAct molecular interaction database in 2012

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Database resources of the National Center for Biotechnology Information

(2011) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

Sex Hormones in Autism: Androgens and Estrogens Differentially and Reciprocally Regulate RORA, a Novel Candidate Gene for Autism

(2011) Tewarit Sarachana et al.   PLoS One

Differential marker protein expression specifies rarefaction zone-containing human Adark spermatogonia

(2011) Kathrein von Kopylow et al.   REPRODUCTION

Profiling spermatogenic failure in adult testes bearing Sox9-deficient Sertoli cells identifies genes involved in feminization, inflammation and stress

(2011) Aurélie Lardenois et al.   Reproductive Biology and Endocrinology

Expression of UTF1 in Primary and Metastatic Testicular Germ Cell Tumors

(2010) Peng Wang et al.   AMERICAN JOURNAL OF CLINICAL PATHOLOGY

Mouse models in male fertility research

(2010) Duangporn Jamsai et al.   ASIAN JOURNAL OF ANDROLOGY

Microarray-Based Analysis of Cell-Cycle Gene Expression During Spermatogenesis in the Mouse1

(2010) Dipanwita Roy Choudhury et al.   BIOLOGY OF REPRODUCTION

Cryptorchidism and hypospadias as a sign of testicular dysgenesis syndrome (TDS): Environmental connection

(2010) Jorma Toppari et al.   BIRTH DEFECTS RESEARCH PART A-CLINICAL AND MOLECULAR TERATOLOGY

Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data

(2010) Robert C McLeay et al.   BMC BIOINFORMATICS

Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells

(2010) Igor Martianov et al.   BMC GENOMICS

Mitotic Expression of Spo13 Alters M-Phase Progression and Nucleolar Localization of Cdc14 in Budding Yeast

(2010) E. Varela et al.   GENETICS

Screening for biomarkers of spermatogonia within the human testis: a whole genome approach

(2010) Kathrein von Kopylow et al.   HUMAN REPRODUCTION

Intrauterine exposure to mild analgesics is a risk factor for development of male reproductive disorders in human and rat

(2010) David Møbjerg Kristensen et al.   HUMAN REPRODUCTION

The expression of ELK transcription factors in adult DRG: Novel isoforms, antisense transcripts and upregulation by nerve damage

(2010) Niall Kerr et al.   MOLECULAR AND CELLULAR NEUROSCIENCE

A map of human genome variation from population-scale sequencing

(2010) Richard M. Durbin et al.   NATURE

Functional cooperation between CREM and GCNF directs gene expression in haploid male germ cells

(2010) Mirjana Rajković et al.   NUCLEIC ACIDS RESEARCH

The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics

(2010) J. A. Blake et al.   NUCLEIC ACIDS RESEARCH

NCBI GEO: archive for functional genomics data sets--10 years on

(2010) T. Barrett et al.   NUCLEIC ACIDS RESEARCH

The BioGRID Interaction Database: 2011 update

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Database resources of the National Center for Biotechnology Information

(2010) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

Ongoing and future developments at the Universal Protein Resource

(2010)   NUCLEIC ACIDS RESEARCH

Transcription and post-transcriptional regulation of spermatogenesis

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The biology of spermatogenesis: the past, present and future

(2010) C. Y. Cheng et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Environmental/lifestyle effects on spermatogenesis

(2010) R. M. Sharpe   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ontology-Based Meta-Analysis of Global Collections of High-Throughput Public Data

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GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle

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LEF1 in Androgen-Independent Prostate Cancer: Regulation of Androgen Receptor Expression, Prostate Cancer Growth, and Invasion

(2009) Y. Li et al.   CANCER RESEARCH

Cancer/testis (CT) antigens: Potential targets for immunotherapy

(2009) Otavia L. Caballero et al.   CANCER SCIENCE

Gene knockouts that affect male fertility: novel targets for contraception

(2009) Rajesh et al.   Frontiers in Bioscience-Landmark

Disrupted gene pattern in patients with repeated in vitro fertilization (IVF) failure

(2009) M. Koler et al.   HUMAN REPRODUCTION

Ovol2 Suppresses Cell Cycling and Terminal Differentiation of Keratinocytes by Directly Repressing c-MycandNotch1

(2009) Julie Wells et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mammalian Heat Shock Factor 1 Is Essential for Oocyte Meiosis and Directly Regulates Hsp90α Expression

(2009) Aïcha Metchat et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Osteogenic Transcription Factor Runx2 Controls Genes Involved in Sterol/Steroid Metabolism, Including Cyp11a1 in Osteoblasts

(2009) Nadiya M. Teplyuk et al.   MOLECULAR ENDOCRINOLOGY

ChIP–seq: advantages and challenges of a maturing technology

(2009) Peter J. Park   NATURE REVIEWS GENETICS

A census of human transcription factors: function, expression and evolution

(2009) Juan M. Vaquerizas et al.   NATURE REVIEWS GENETICS

JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles

(2009) Elodie Portales-Casamar et al.   NUCLEIC ACIDS RESEARCH

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Prepubertal human spermatogonia and mouse gonocytes share conserved gene expression of germline stem cell regulatory molecules

(2009) X. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spermatogonial stem cells in higher primates: are there differences from those in rodents?

(2009) Brian P Hermann et al.   REPRODUCTION

Epigenetic Transgenerational Effects of Endocrine Disruptors on Male Reproduction

(2009) Carlos Guerrero-Bosagna et al.   SEMINARS IN REPRODUCTIVE MEDICINE

EGR4 Is a Master Gene Responsible for Fertility in Cryptorchidism

(2009) F. Hadziselimovic et al.   Sexual Development

Characterization of human UTF1, a chromatin-associated protein with repressor activity expressed in pluripotent cells

(2009) Susanne M. Kooistra et al.   Stem Cell Research

Regulation of Spermatogonial Stem Cell Self-Renewal in Mammals

(2008) Jon M. Oatley et al.   Annual Review of Cell and Developmental Biology

The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology

(2008) Frédéric Chalmel et al.   BMC BIOINFORMATICS

Facts from text: can text mining help to scale-up high-quality manual curation of gene products with ontologies?

(2008) R. Winnenburg et al.   BRIEFINGS IN BIOINFORMATICS

The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation

(2008) E. Wingender   BRIEFINGS IN BIOINFORMATICS

Presumed pluripotency markers UTF-1 and REX-1 are expressed in human adult testes and germ cell neoplasms

(2008) D. M. Kristensen et al.   HUMAN REPRODUCTION

Binding of RFX2 and NF-Y to the testis-specific histone H1t promoter may be required for transcriptional activation in primary spermatocytes

(2008) Jane M. vanWert et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Expression of Runx2 transcription factor in non-skeletal tissues, sperm and brain

(2008) Jae-Hwan Jeong et al.   JOURNAL OF CELLULAR PHYSIOLOGY

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Human Protein Reference Database--2009 update

(2008) T. S. Keshava Prasad et al.   NUCLEIC ACIDS RESEARCH

Identification of ETS-like transcription factor 4 as a novel androgen receptor target in prostate cancer cells

(2008) H Makkonen et al.   ONCOGENE

Stage-specific gene expression is a fundamental characteristic of rat spermatogenic cells and Sertoli cells

(2008) D. S. Johnston et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Promoter ChIP-chip analysis in mouse testis reveals Y chromosome occupancy by HSF2

(2008) M. Akerfelt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Expression of the pluripotency marker UTF1 is restricted to a subpopulation of early A spermatogonia in rat testis

(2008) Maaike P A van Bragt et al.   REPRODUCTION

Successful treatment of unilateral cryptorchid boys risking infertility with LH-RH analogue

(2008) Faruk Hadziselimovic   International Braz J Urol

Linking genes to literature: text mining, information extraction, and retrieval applications for biology

(2008) Martin Krallinger et al.   GENOME BIOLOGY