Disentangling the genetic effects of refugial isolation and range expansion in a trans-continentally distributed species

Genetic effects of landscape, habitat preference and demography on three co-occurring turtle species

(2017) Brendan N. Reid et al.   MOLECULAR ECOLOGY

Genetic surfing, not allopatric divergence, explains spatial sorting of mitochondrial haplotypes in venomous coralsnakes

(2016) Jeffrey W. Streicher et al.   EVOLUTION

Contrasting support for alternative models of genomic variation based on microhabitat preference: species-specific effects of climate change in alpine sedges

(2016) Rob Massatti et al.   MOLECULAR ECOLOGY

Comparative phylogeography clarifies the complexity and problems of continental distribution that drove A. R. Wallace to favor islands

(2016) Brett R. Riddle   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

spThin: an R package for spatial thinning of species occurrence records for use in ecological niche models

(2015) Matthew E. Aiello-Lammens et al.   ECOGRAPHY

Fine-scale landscape genetics of the American badger (Taxidea taxus): disentangling landscape effects and sampling artifacts in a poorly understood species

(2015) E M Kierepka et al.   HEREDITY

On the importance of being structured: instantaneous coalescence rates and human evolution—lessons for ancestral population size inference?

(2015) O Mazet et al.   HEREDITY

Genetic Assessment of Taxonomic Uncertainty in Painted Turtles

(2015) Evelyn L. Jensen et al.   JOURNAL OF HERPETOLOGY

Late Glacial Demographic Expansion Motivates a Clock Overhaul for Population Genetics

(2015) Thierry B. Hoareau   SYSTEMATIC BIOLOGY

Land use patterns skew sex ratios, decrease genetic diversity and trump the effects of recent climate change in an endangered turtle

(2014) Brendan N. Reid et al.   DIVERSITY AND DISTRIBUTIONS

ENMeval: An R package for conducting spatially independent evaluations and estimating optimal model complexity forMaxentecological niche models

(2014) Robert Muscarella et al.   Methods in Ecology and Evolution

Surfing in tortoises? Empirical signs of genetic structuring owing to range expansion

(2013) E. Gracia et al.   Biology Letters

Continental phylogeography of an ecologically and morphologically diverse Neotropical songbird, Zonotrichia capensis

(2013) Stephen C Lougheed et al.   BMC EVOLUTIONARY BIOLOGY

When the shoe doesn’t fit: applying conservation unit concepts to western painted turtles at their northern periphery

(2013) Evelyn L. Jensen et al.   CONSERVATION GENETICS

A practical guide to MaxEnt for modeling species’ distributions: what it does, and why inputs and settings matter

(2013) Cory Merow et al.   ECOGRAPHY

INTEGRATIVE TESTING OF HOW ENVIRONMENTS FROM THE PAST TO THE PRESENT SHAPE GENETIC STRUCTURE ACROSS LANDSCAPES

(2013) Qixin He et al.   EVOLUTION

Selecting thresholds for the prediction of species occurrence with presence-only data

(2013) Canran Liu et al.   JOURNAL OF BIOGEOGRAPHY

Ecological niche models in phylogeographic studies: applications, advances and precautions

(2013) Diego F. Alvarado-Serrano et al.   Molecular Ecology Resources

Eemian interglacial reconstructed from a Greenland folded ice core

(2013) D. Dahl-Jensen et al.   NATURE

Evaluating the Significance of Paleophylogeographic Species Distribution Models in Reconstructing Quaternary Range-Shifts of Nearctic Chelonians

(2013) Dennis Rödder et al.   PLoS One

Congruent morphological and genetic differentiation as a signature of range expansion in a fragmented landscape

(2013) Ronan Ledevin et al.   Ecology and Evolution

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

(2012) R. Peakall et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Serial Founder Effects During Range Expansion: A Spatial Analog of Genetic Drift

(2012) M. Slatkin et al.   GENETICS

Reliability of genetic bottleneck tests for detecting recent population declines

(2012) M. ZACHARIAH PEERY et al.   MOLECULAR ECOLOGY

abc: an R package for approximate Bayesian computation (ABC)

(2012) Katalin Csilléry et al.   Methods in Ecology and Evolution

The Influence of Late Quaternary Climate-Change Velocity on Species Endemism

(2011) B. Sandel et al.   SCIENCE

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

SPLATCHE2: a spatially explicit simulation framework for complex demography, genetic admixture and recombination

(2010) Nicolas Ray et al.   BIOINFORMATICS

The effect of the extent of the study region on GIS models of species geographic distributions and estimates of niche evolution: preliminary tests with montane rodents (genus Nephelomys) in Venezuela

(2010) Robert P. Anderson et al.   JOURNAL OF BIOGEOGRAPHY

Refugial persistence and postglacial recolonization of North America by the cold-tolerant herbaceous plant Orthilia secunda

(2010) GEMMA E. BEATTY et al.   MOLECULAR ECOLOGY

Exploring the population genetic consequences of the colonization process with spatio-temporally explicit models: insights from coupled ecological, demographic and genetic models in montane grasshoppers

(2010) L. LACEY KNOWLES et al.   MOLECULAR ECOLOGY

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Approximate Bayesian Computation (ABC) in practice

(2010) Katalin Csilléry et al.   TRENDS IN ECOLOGY & EVOLUTION

The art of modelling range-shifting species

(2010) Jane Elith et al.   Methods in Ecology and Evolution

Genetic Consequences of Range Expansions

(2009) Laurent Excoffier et al.   Annual Review of Ecology Evolution and Systematics

Phylogeography and ecological niche modelling of the New Zealand stick insectClitarchus hookeri(White) support survival in multiple coastal refugia

(2009) Thomas R. Buckley et al.   JOURNAL OF BIOGEOGRAPHY

Non-linear regression models for Approximate Bayesian Computation

(2009) Michael G. B. Blum et al.   STATISTICS AND COMPUTING

Ecological niche modelling of montane mammals in the Great Basin, North America: examining past and present connectivity of species across basins and ranges

(2008) Eric Waltari et al.   JOURNAL OF BIOGEOGRAPHY

Genetic variation across species’ geographical ranges: the central–marginal hypothesis and beyond

(2008) C. G. ECKERT et al.   MOLECULAR ECOLOGY

Surfing during population expansions promotes genetic revolutions and structuration

(2008) Laurent Excoffier et al.   TRENDS IN ECOLOGY & EVOLUTION

Phylogeographic insights into cryptic glacial refugia

(2008) J PROVAN et al.   TRENDS IN ECOLOGY & EVOLUTION

genepop’007: a complete re-implementation of the genepop software for Windows and Linux

(2007) FRANÇOIS ROUSSET   Molecular Ecology Resources

Phylogeography of Diadophis punctatus: Extensive lineage diversity and repeated patterns of historical demography in a trans-continental snake

(2007) Frank M. Fontanella et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION