Genome-wide association analyses of leaf rust resistance in cultivated emmer wheat

Identification and characterization of the novel leaf rust resistance gene Lr81 in wheat

(2022) Xiangyang Xu et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping of leaf rust and stripe rust resistance in wheat accessions using the 90K SNP array

(2021) Peipei Zhang et al.   THEORETICAL AND APPLIED GENETICS

rMVP: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated tool for Genome-Wide Association Study

(2021) Lilin Yin et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Genotype groups of the wheat leaf rust fungus Puccinia triticina in the United States as determined by genotyping by sequencing

(2021) James Kolmer et al.   PHYTOPATHOLOGY

GAPIT Version 3: Boosting Power and Accuracy for Genomic Association and Prediction

(2021) Jiabo Wang et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

The Emergence of New Aggressive Leaf Rust Races with the Potential to Supplant the Resistance of Wheat Cultivars

(2021) Reda Ibrahim Omara et al.   Biology-Basel

Unravelling consensus genomic regions conferring leaf rust resistance in wheat via meta‐QTL analysis

(2021) Aduragbemi Amo et al.   Plant Genome

Wheat diseases on the prairies: A Canadian story

(2020) Reem Aboukhaddour et al.   PLANT PATHOLOGY

A Probabilistic Bio-economic Assessment of the Global Consequences of Wheat Leaf Rust

(2020) Yuan Chai et al.   PHYTOPATHOLOGY

Identification of New Leaf Rust Resistance Loci in Wheat and Wild Relatives by Array-Based SNP Genotyping and Association Genetics

(2020) Fizza Fatima et al.   Frontiers in Plant Science

The global burden of pathogens and pests on major food crops

(2019) Serge Savary et al.   Nature Ecology & Evolution

Mapping and characterization of two stem rust resistance genes derived from cultivated emmer wheat accession PI 193883

(2019) Jyoti S. Sharma et al.   THEORETICAL AND APPLIED GENETICS

QTL mapping of resistance to tan spot induced by race 2 of Pyrenophora tritici-repentis in tetraploid wheat

(2019) Yuan Liu et al.   THEORETICAL AND APPLIED GENETICS

Shifting the limits in wheat research and breeding using a fully annotated reference genome

(2018) et al.   SCIENCE

BLINK: A package for the next level of Genome-Wide association studies with both individuals and markers in the millions

(2018) Meng Huang et al.   GigaScience

Rapid cloning of genes in hexaploid wheat using cultivar-specific long-range chromosome assembly

(2017) Anupriya Kaur Thind et al.   NATURE BIOTECHNOLOGY

Inheritance and Bulked Segregant Analysis of Leaf Rust and Stem Rust Resistance in Durum Wheat Genotypes

(2017) Meriem Aoun et al.   PHYTOPATHOLOGY

Genetically Divergent Types of the Wheat Leaf Fungus Puccinia triticina in Ethiopia, a Center of Tetraploid Wheat Diversity

(2016) J. A. Kolmer et al.   PHYTOPATHOLOGY

Genome Wide Association Study of Seedling and Adult Plant Leaf Rust Resistance in Elite Spring Wheat Breeding Lines

(2016) Liangliang Gao et al.   PLoS One

Genome-Wide Association Mapping of Leaf Rust Response in a Durum Wheat Worldwide Germplasm Collection

(2016) Meriem Aoun et al.   Plant Genome

Iterative Usage of Fixed and Random Effect Models for Powerful and Efficient Genome-Wide Association Studies

(2016) Xiaolei Liu et al.   PLoS Genetics

Harnessing Diversity in Wheat to Enhance Grain Yield, Climate Resilience, Disease and Insect Pest Resistance and Nutrition Through Conventional and Modern Breeding Approaches

(2016) Suchismita Mondal et al.   Frontiers in Plant Science

A recently evolved hexose transporter variant confers resistance to multiple pathogens in wheat

(2015) John W Moore et al.   NATURE GENETICS

First Report of a Wheat Leaf Rust (Puccinia triticina) Phenotype with High Virulence to Durum Wheat in the Great Plains Region of the United States

(2015) J. A. Kolmer   PLANT DISEASE

LinkImpute: Fast and Accurate Genotype Imputation for Nonmodel Organisms

(2015) Daniel Money et al.   G3-Genes Genomes Genetics

Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array

(2014) Shichen Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

Association Analysis of Stem Rust Resistance in U.S. Winter Wheat

(2014) Dadong Zhang et al.   PLoS One

Lr67/Yr46 confers adult plant resistance to stem rust and powdery mildew in wheat

(2014) Sybil A. Herrera-Foessel et al.   THEORETICAL AND APPLIED GENETICS

The past, present and future of breeding rust resistant wheat

(2014) Jeffrey G. Ellis et al.   Frontiers in Plant Science

Leaf Rust of Wheat: Pathogen Biology, Variation and Host Resistance

(2013) James Kolmer   Forests

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Field Resistance to the Ug99 Race Group of the Stem Rust Pathogen in Spring Wheat Landraces

(2012) M. Newcomb et al.   PLANT DISEASE

Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach

(2012) Jesse A. Poland et al.   PLoS One

Lr68: a new gene conferring slow rusting resistance to leaf rust in wheat

(2012) Sybil A. Herrera-Foessel et al.   THEORETICAL AND APPLIED GENETICS

Identification of Ug99 stem rust resistance loci in winter wheat germplasm using genome-wide association analysis

(2012) Long-Xi Yu et al.   THEORETICAL AND APPLIED GENETICS

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

Global status of wheat leaf rust caused by Puccinia triticina

(2011) J. Huerta-Espino et al.   EUPHYTICA

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Cultivated emmer wheat (Triticum dicoccon Schrank), an old crop with promising future: a review

(2010) Maria Zaharieva et al.   GENETIC RESOURCES AND CROP EVOLUTION

Mixed linear model approach adapted for genome-wide association studies

(2010) Zhiwu Zhang et al.   NATURE GENETICS

Mapping genes Lr53 and Yr35 on the short arm of chromosome 6B of common wheat with microsatellite markers and studies of their association with Lr36

(2010) N. A. Dadkhodaie et al.   THEORETICAL AND APPLIED GENETICS

Physiologic Specialization of Puccinia triticina on Wheat in the United States in 2007

(2009) J. A. Kolmer et al.   PLANT DISEASE

A Kinase-START Gene Confers Temperature-Dependent Resistance to Wheat Stripe Rust

(2009) D. Fu et al.   SCIENCE

A Putative ABC Transporter Confers Durable Resistance to Multiple Fungal Pathogens in Wheat

(2009) S. G. Krattinger et al.   SCIENCE

First Detection of Virulence in Puccinia triticina to Resistance Genes Lr27 + Lr31 Present in Durum Wheat in Mexico

(2008) J. Huerta-Espino et al.   PLANT DISEASE