Metagenomic views on taxonomic and functional profiles of the Himalayan Tsomgo cold lake and unveiling its deterzome potential

Molecular dissemination of emerging antibiotic, biocide, and metal co-resistomes in the Himalayan hot springs

(2022) Nitish Sharma et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes

(2021) Carlos A. Ruiz-Perez et al.   BMC BIOINFORMATICS

A multi-omic screening approach for the discovery of thermoactive glycoside hydrolases

(2021) Philip Busch et al.   EXTREMOPHILES

Plasma Hsp90 levels in patients with systemic sclerosis and relation to lung and skin involvement: a cross-sectional and longitudinal study

(2021) Hana Štorkánová et al.   Scientific Reports

Molecular profiling of microbial community structure and their CAZymes via metagenomics, from Tsomgo lake in the Eastern Himalayas

(2021) Aditi Rai et al.   ARCHIVES OF MICROBIOLOGY

Metagenomic analysis exploring taxonomic and functional diversity of bacterial communities of a Himalayan urban fresh water lake

(2021) Tawseef Ahmad et al.   PLoS One

Characterization of Two Unique Cold-Active Lipases Derived from a Novel Deep-Sea Cold Seep Bacterium

(2021) Chenchen Guo et al.   Microorganisms

First Insights into the Microbiology of Three Antarctic Briny Systems of the Northern Victoria Land

(2021) Maria Papale et al.   Diversity-Basel

Current prospective in using cold-active enzymes as eco-friendly detergent additive

(2020) Abdullah A. Al-Ghanayem et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Microbial Ecology from the Himalayan Cryosphere Perspective

(2020) Kusum Dhakar et al.   Microorganisms

Discovery and Characterization of a New Cold-Active Protease From an Extremophilic Bacterium via Comparative Genome Analysis and in vitro Expression

(2020) Amedea Perfumo et al.   Frontiers in Microbiology

Production and characterisation of lipase for application in detergent industry from a novel Pseudomonas helmanticensis HS6

(2020) Loreni Chiring Phukon et al.   BIORESOURCE TECHNOLOGY

A comparative metagenomic study reveals microbial diversity and their role in the biogeochemical cycling of Pangong lake

(2020) Rashmi Rathour et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Pseudarthrobacter psychrotolerans sp. nov., a cold-adapted bacterium isolated from Antarctic soil

(2020) Yoonjae Shin et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Comparative genomics and molecular adaptational analysis of Arthrobacter from Sikkim Himalaya provided insights into its survivability under multiple high-altitude stress

(2020) Srijana Mukhia et al.   GENOMICS

Communication mechanisms in extremophiles: Exploring their existence and industrial applications

(2019) Amandeep Kaur et al.   MICROBIOLOGICAL RESEARCH

Psychrotrophs of the genus Janthinobacterium with potential to weather potassium aluminosilicate mineral

(2019) Mahendra Vikram Singh Rajawat et al.   3 Biotech

Microbial community composition in alpine lake sediments from the Hengduan Mountains

(2019) Binqiang Liao et al.   MicrobiologyOpen

Effects of detergents on natural ecosystems and wastewater treatment processes: a review

(2019) Seyyed Alireza Mousavi et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Biofilms: The Microbial “Protective Clothing” in Extreme Environments

(2019) Wen Yin et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies

(2019) Dongwan D. Kang et al.   PeerJ

Assessing the performance of different approaches for functional and taxonomic annotation of metagenomes

(2019) Javier Tamames et al.   BMC GENOMICS

Molecular and biotechnological aspects of secondary metabolites in actinobacteria

(2019) Richa Salwan et al.   MICROBIOLOGICAL RESEARCH

Taxonomy and functional interactions in upper and bottom waters of an oligotrophic high-mountain deep lake (Redon, Pyrenees) unveiled by microbial metagenomics

(2019) Tomas Llorens-Marès et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Selective substrate uptake: The role of ATP-binding cassette (ABC) importers in pathogenesis

(2018) Kari J. Tanaka et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Cold active pectinase, amylase and protease production by yeast isolates obtained from environmental samples

(2018) Ceren Daskaya-Dikmen et al.   EXTREMOPHILES

Cryobacterium aureum sp. nov., a psychrophilic bacterium isolated from glacier ice collected from the ice tongue surface

(2018) Qing Liu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

KBase: The United States Department of Energy Systems Biology Knowledgebase

(2018) Adam P Arkin et al.   NATURE BIOTECHNOLOGY

Isolation and characterization of a cold-active, alkaline, detergent stable α-amylase from a novel bacterium Bacillus subtilis N8

(2018) Nihan Arabacı et al.   PREPARATIVE BIOCHEMISTRY & BIOTECHNOLOGY

Structural absorption by barbule microstructures of super black bird of paradise feathers

(2018) Dakota E. McCoy et al.   Nature Communications

Genomic insights into Mycobacterium simiae human colonization

(2018) José L. Steffani-Vallejo et al.   Standards in Genomic Sciences

metaSPAdes: a new versatile metagenomic assembler

(2017) Sergey Nurk et al.   GENOME RESEARCH

Complete genome of Arthrobacter alpinus strain R3.8, bioremediation potential unraveled with genomic analysis

(2017) Wah-Seng See-Too et al.   Standards in Genomic Sciences

Diversity of proteolytic microbes isolated from Antarctic freshwater lakes and characteristics of their cold-active proteases

(2017) Mihoko Matsui et al.   Polar Science

Shifts in diversity and function of lake bacterial communities upon glacier retreat

(2016) Hannes Peter et al.   ISME Journal

Complete genome sequence of Arthrobacter alpinus ERGS4:06, a yellow pigmented bacterium tolerant to cold and radiations isolated from Sikkim Himalaya

(2016) Rakshak Kumar et al.   JOURNAL OF BIOTECHNOLOGY

BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences

(2016) Minoru Kanehisa et al.   JOURNAL OF MOLECULAR BIOLOGY

Fast and sensitive taxonomic classification for metagenomics with Kaiju

(2016) Peter Menzel et al.   Nature Communications

Ultrastructural Characterization of the Lower Motor System in a Mouse Model of Krabbe Disease

(2016) Valentina Cappello et al.   Scientific Reports

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Cold active hydrolytic enzymes production by psychrotrophic Bacilli isolated from three sub-glacial lakes of NW Indian Himalayas

(2015) Ajar Nath Yadav et al.   JOURNAL OF BASIC MICROBIOLOGY

Complete genome sequence of Arthrobacter sp. ERGS1:01, a putative novel bacterium with prospective cold active industrial enzymes, isolated from East Rathong glacier in India

(2015) Rakshak Kumar et al.   JOURNAL OF BIOTECHNOLOGY

Genomic and proteomic evidences unravel the UV-resistome of the poly-extremophile Acinetobacter sp. Ver3

(2015) Daniel Kurth et al.   Frontiers in Microbiology

Planktonic and sedimentary bacterial diversity of Lake Sayram in summer

(2015) Lei Fang et al.   MicrobiologyOpen

Living with detergents: pyrosequencing-based assessment of bacterial community structures in soils subjected for decades to contamination by detergents

(2014) Rafael A. Rojas-Herrera et al.   ANNALS OF MICROBIOLOGY

Verrucomicrobia Are Candidates for Polysaccharide-Degrading Bacterioplankton in an Arctic Fjord of Svalbard

(2014) Z. Cardman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Detergent-Compatible Proteases: Microbial Production, Properties, and Stain Removal Analysis

(2014) Francois Niyongabo Niyonzima et al.   PREPARATIVE BIOCHEMISTRY & BIOTECHNOLOGY

Psychrophiles

(2013) Khawar S. Siddiqui et al.   Annual Review of Earth and Planetary Sciences

Use of Pseudomonas spp. for the bioremediation of environmental pollutants: a review

(2013) Samina Wasi et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Screening and characterization of a novel alkaline lipase from Acinetobacter calcoaceticus 1-7 isolated from Bohai Bay in China for detergent formulation

(2012) Haikuan Wang et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Energy and carbon impact from residential laundry in the United States

(2010) Jay S. Golden et al.   Journal of Integrative Environmental Sciences

Yeasts from high-altitude lakes: influence of UV radiation

(2009) Diego Libkind et al.   FEMS MICROBIOLOGY ECOLOGY

Isolation and characterization of a novel thermostable α-amylase from Korean pine seeds

(2009) Md. Abul Kalam Azad et al.   New Biotechnology

Bacterial Degradation of Aromatic Compounds

(2009) Jong-Su Seo et al.   International Journal of Environmental Research and Public Health

Coping with Our Cold Planet

(2008) D. F. Rodrigues et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cold active microbial lipases: Some hot issues and recent developments

(2008) Babu Joseph et al.   BIOTECHNOLOGY ADVANCES