In utero origin of myelofibrosis presenting in adult monozygotic twins

Life histories of myeloproliferative neoplasms inferred from phylogenies

(2022) Nicholas Williams et al.   NATURE

Reconstructing the Lineage Histories and Differentiation Trajectories of Individual Cancer Cells in Myeloproliferative Neoplasms

(2021) Debra Van Egeren et al.   Cell Stem Cell

Interferon-alpha for treating polycythemia vera yields improved myelofibrosis-free and overall survival

(2021) Ghaith Abu-Zeinah et al.   LEUKEMIA

A unified haplotype-based method for accurate and comprehensive variant calling

(2021) Daniel P. Cooke et al.   NATURE BIOTECHNOLOGY

The evolutionary history of 2,658 cancers

(2020) Moritz Gerstung et al.   NATURE

Timing the initiation of multiple myeloma

(2020) Even H. Rustad et al.   Nature Communications

Integrating clinical features with genetic factors enhances survival prediction for adults with acute myeloid leukemia

(2020) Douglas R. A. Silveira et al.   Blood Advances

Inherited myeloproliferative neoplasm risk affects haematopoietic stem cells

(2020) Erik L. Bao et al.   NATURE

Unravelling Intratumoral Heterogeneity through High-Sensitivity Single-Cell Mutational Analysis and Parallel RNA Sequencing

(2019) Alba Rodriguez-Meira et al.   MOLECULAR CELL

Prevalence and phenotypes of JAK2 V617F and calreticulin mutations in a Danish general population

(2019) Sabrina Cordua et al.   BLOOD

SigProfilerMatrixGenerator: a tool for visualizing and exploring patterns of small mutational events

(2019) Erik N. Bergstrom et al.   BMC GENOMICS

Concordance for clonal hematopoiesis is limited in elderly twins

(2019) Margarete Alice Fabre et al.   BLOOD

Clonal hematopoiesis in elderly twins: concordance, discordance and mortality

(2019) Jakob Werner Hansen et al.   BLOOD

Clonal hematopoiesis in human aging and disease

(2019) Siddhartha Jaiswal et al.   SCIENCE

Myeloproliferative Neoplasms in Danish Twins

(2018) Michael Asger  Andersen et al.   ACTA HAEMATOLOGICA

AnnotSV: an integrated tool for structural variations annotation

(2018) Véronique Geoffroy et al.   BIOINFORMATICS

Timing the Landmark Events in the Evolution of Clear Cell Renal Cell Cancer: TRACERx Renal

(2018) Thomas J. Mitchell et al.   CELL

Strelka2: fast and accurate calling of germline and somatic variants

(2018) Sangtae Kim et al.   NATURE METHODS

MutationalPatterns: comprehensive genome-wide analysis of mutational processes

(2018) Francis Blokzijl et al.   Genome Medicine

Genetics of hearing loss in the Arab population of Northern Israel

(2018) Nada Danial-Farran et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

CADD: predicting the deleteriousness of variants throughout the human genome

(2018) Philipp Rentzsch et al.   NUCLEIC ACIDS RESEARCH

Stan: A Probabilistic Programming Language

(2017) Bob Carpenter et al.   Journal of Statistical Software

Risk of developing chronic myeloid neoplasms in well-differentiated thyroid cancer patients treated with radioactive iodine

(2017) R J Molenaar et al.   LEUKEMIA

Transplacental transfer of essential thrombocythemia in monozygotic twins

(2016) R. Valdes-Mas et al.   BLOOD

Genomic Classification and Prognosis in Acute Myeloid Leukemia

(2016) Elli Papaemmanuil et al.   NEW ENGLAND JOURNAL OF MEDICINE

Heatmapper: web-enabled heat mapping for all

(2016) Sasha Babicki et al.   NUCLEIC ACIDS RESEARCH

Manta: rapid detection of structural variants and indels for germline and cancer sequencing applications

(2015) Xiaoyu Chen et al.   BIOINFORMATICS

SpeedSeq: ultra-fast personal genome analysis and interpretation

(2015) Colby Chiang et al.   NATURE METHODS

SIFT missense predictions for genomes

(2015) Robert Vaser et al.   Nature Protocols

COSMIC: exploring the world's knowledge of somatic mutations in human cancer

(2014) Simon A. Forbes et al.   NUCLEIC ACIDS RESEARCH

Heterogeneity of genomic evolution and mutational profiles in multiple myeloma

(2014) Niccolo Bolli et al.   Nature Communications

LUMPY: a probabilistic framework for structural variant discovery

(2014) Ryan M Layer et al.   GENOME BIOLOGY

Signatures of mutational processes in human cancer

(2013) Ludmil B. Alexandrov et al.   NATURE

Somatic CALR Mutations in Myeloproliferative Neoplasms with Nonmutated JAK2

(2013) J. Nangalia et al.   NEW ENGLAND JOURNAL OF MEDICINE

Somatic Mutations of Calreticulin in Myeloproliferative Neoplasms

(2013) Thorsten Klampfl et al.   NEW ENGLAND JOURNAL OF MEDICINE

The UCSC genome browser and associated tools

(2012) R. M. Kuhn et al.   BRIEFINGS IN BIOINFORMATICS

The Life History of 21 Breast Cancers

(2012) Serena Nik-Zainal et al.   CELL

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Initiating and Cancer-Propagating Cells in TEL-AML1-Associated Childhood Leukemia

(2008) D. Hong et al.   SCIENCE