Characterization and structural analysis of a thermophilic GH11 xylanase from compost metatranscriptome

Tuning the transglycosylation reaction of a GH11 xylanase by a delicate enhancement of its thumb flexibility

(2021) Kim Marneth et al.   CHEMBIOCHEM

Metatranscriptome-based investigation of flavor-producing core microbiota in different fermentation stages of dajiang, a traditional fermented soybean paste of Northeast China

(2020) Feiyu An et al.   FOOD CHEMISTRY

A Brief History of Protein Sorting Prediction

(2019) Henrik Nielsen et al.   PROTEIN JOURNAL

Efficient newton–raphson/singular value decomposition‐based optimization scheme with dynamically updated critical condition number for rapid convergence of weighted histogram analysis method equations

(2019) Roma Mukhopadhyay et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Pathway and mechanism of nitrogen transformation during composting: Functional enzymes and genes under different concentrations of PVP-AgNPs

(2018) Guangming Zeng et al.   BIORESOURCE TECHNOLOGY

Bioinformatics tools for quantitative and functional metagenome and metatranscriptome data analysis in microbes

(2018) Sheng-Yong Niu et al.   BRIEFINGS IN BIOINFORMATICS

Understanding the pH-Dependent Reaction Mechanism of a Glycoside Hydrolase Using High Resolution X-Ray and Neutron Crystallography

(2018) Zhihong Li et al.   ACS Catalysis

Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics

(2016) Luciana Principal Antunes et al.   Scientific Reports

Distinct Roles for Carbohydrate-Binding Modules of Glycoside Hydrolase 10 (GH10) and GH11 Xylanases from Caldicellulosiruptor sp. Strain F32 in Thermostability and Catalytic Efficiency

(2015) Dong-Dong Meng et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Deciphering key features in protein structures with the new ENDscript server

(2014) Xavier Robert et al.   NUCLEIC ACIDS RESEARCH

Improvement of alkali stability and thermostability of Paenibacillus campinasensis Family-11 xylanase by directed evolution and site-directed mutagenesis

(2013) Hongchen Zheng et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Adepth: new representation and its implications for atomic depths of macromolecules

(2013) Shu-wen W. Chen et al.   NUCLEIC ACIDS RESEARCH

Cloning, Expression and Characteristics of a Novel Alkalistable and Thermostable Xylanase Encoding Gene (Mxyl) Retrieved from Compost-Soil Metagenome

(2013) Digvijay Verma et al.   PLoS One

Overview of theCCP4 suite and current developments

(2011) Martyn D. Winn et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

GH11 xylanases: Structure/function/properties relationships and applications

(2011) Gabriel Paës et al.   BIOTECHNOLOGY ADVANCES

Thermostable recombinant xylanases from Nonomuraea flexuosa and Thermoascus aurantiacus show distinct properties in the hydrolysis of xylans and pretreated wheat straw

(2011) Junhua Zhang et al.   Biotechnology for Biofuels

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Five mutations in N-terminus confer thermostability on mesophilic xylanase

(2010) Shan Zhang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Mutational and crystallographic analyses of the active site residues of the bacillus circulans xylanase

(2010) Warren W. Wakarchuk et al.   PROTEIN SCIENCE

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

An alkaline active xylanase: Insights into mechanisms of high pH catalytic adaptation

(2009) Gashaw Mamo et al.   BIOCHIMIE

Crystallographic and activity-based evidence for thumb flexibility and its relevance in glycoside hydrolase family 11 xylanases

(2009) Annick Pollet et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Microscale Analysis ofin VitroAnaerobic Degradation of Lignocellulosic Wastes by Rumen Microorganisms

(2007) Zhen-Hu Hu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY