miRNA Mediated Regulation and Interaction between Plants and Pathogens

Genome engineering for crop improvement and future agriculture

(2021) Caixia Gao   CELL

Comparative transcriptome analysis uncovers regulatory roles of long non-coding RNAs involved in resistance to powdery mildew in melon

(2020) Chao Gao et al.   BMC GENOMICS

miR159 represses a constitutive pathogen defense response in tobacco

(2020) Zihui Zheng et al.   PLANT PHYSIOLOGY

ath-miR164c influences plant responses to the combined stress of drought and bacterial infection by regulating proline metabolism

(2020) Aarti Gupta et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Expansion of MIR482/2118 by a class‐II transposable element in cotton

(2020) Enhui Shen et al.   PLANT JOURNAL

MicroRNAs Are Involved in Maize Immunity Against Fusarium verticillioides Ear Rot

(2020) Zijian Zhou et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Co-Regulation of Long Non-Coding RNAs with Allele-Specific Genes in Wheat Responding to Powdery Mildew Infection

(2020) Weiguo Hu et al.   Agronomy-Basel

Silencing AC1 of Tomato leaf curl virus using artificial microRNA confers resistance to leaf curl disease in transgenic tomato

(2020) Namisha Sharma et al.   PLANT CELL REPORTS

Osa-miR398b boosts H2 O2 production and rice blast disease-resistance via multiple superoxide dismutases

(2019) Yan Li et al.   NEW PHYTOLOGIST

Tomato lncRNA23468 functions as a competing endogenous RNA to modulate NBS-LRR genes by decoying miR482b in the tomato-Phytophthora infestans interaction

(2019) Ning Jiang et al.   Horticulture Research

Predicting miRNA-lncRNA interactions and recognizing their regulatory roles in stress response of plants

(2019) Ismalia Bouba et al.   MATHEMATICAL BIOSCIENCES

Modern Trends in Plant Genome Editing: An Inclusive Review of the CRISPR/Cas9 Toolbox

(2019) Ali Razzaq et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Engineering Broad-Spectrum Bacterial Blight Resistance by Simultaneously Disrupting Variable TALE-binding Elements of Multiple Susceptibility Genes in Rice

(2019) Zhengyin Xu et al.   Molecular Plant

Genome-wide Identification of LncRNAs and Analysis of CeRNA Networks during Tomato Resistance to Phytophthora infestans

(2019) Jun Cui et al.   PHYTOPATHOLOGY

Function of miR825 and miR825* as Negative Regulators in Bacillus cereus AR156-elicited Systemic Resistance to Botrytis cinerea in Arabidopsis thaliana

(2019) Pingping Nie et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A Brassica miRNA Regulates Plant Growth and Immunity through Distinct Modes of Action

(2019) Chen Cui et al.   Molecular Plant

Broad-spectrum resistance to bacterial blight in rice using genome editing

(2019) Ricardo Oliva et al.   NATURE BIOTECHNOLOGY

The Cotton miR477-CBP60A Module Participates in Plant Defense Against Verticillium dahlia

(2019) Guang Hu et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

LncRNA39026 Enhances Tomato Resistance to Phytophthora infestans by Decoying miR168a and Inducing PR Gene Expression

(2019) Xinxin Hou et al.   PHYTOPATHOLOGY

Plant miRNA–lncRNA Interaction Prediction with the Ensemble of CNN and IndRNN

(2019) Peng Zhang et al.   Interdisciplinary Sciences-Computational Life Sciences

GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC

(2018) Ruidong Li et al.   BIOINFORMATICS

MiRNA160 is associated with local defense and systemic acquired resistance against Phytophthora infestans infection in potato

(2018) Bhavani Natarajan et al.   JOURNAL OF EXPERIMENTAL BOTANY

Nucleo-cytosolic Shuttling of ARGONAUTE1 Prompts a Revised Model of the Plant MicroRNA Pathway

(2018) Nicolas G. Bologna et al.   MOLECULAR CELL

Trans-Kingdom RNA Silencing in Plant–Fungal Pathogen Interactions

(2018) Chenlei Hua et al.   Molecular Plant

Can-miRn37a mediated suppression of ethylene response factors enhances the resistance of chilli against anthracnose pathogen Colletotrichum truncatum L

(2018) Rukmini Mishra et al.   PLANT SCIENCE

Expression profiling across wild and cultivated tomatoes supports the relevance of early miR482/2118 suppression for Phytophthora resistance

(2018) Sophie de Vries et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Plants send small RNAs in extracellular vesicles to fungal pathogen to silence virulence genes

(2018) Qiang Cai et al.   SCIENCE

The Polycistronic miR166k-166h Positively Regulates Rice Immunity via Post-transcriptional Control of EIN2

(2018) Raquel Salvador-Guirao et al.   Frontiers in Plant Science

FRG3, a Target of slmiR482e-3p, Provides Resistance against the Fungal Pathogen Fusarium oxysporum in Tomato

(2018) Hui-Min Ji et al.   Frontiers in Plant Science

miR394 Acts as a Negative Regulator of Arabidopsis Resistance to B. cinerea Infection by Targeting LCR

(2018) Xing Tian et al.   Frontiers in Plant Science

Poplar miR472a targeting NBS-LRRs is involved in effective defence against the necrotrophic fungus Cytospora chrysosperma

(2018) Yanyan Su et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Phytophthora Effector Suppresses Trans-Kingdom RNAi to Promote Disease Susceptibility

(2018) Yingnan Hou et al.   Cell Host & Microbe

Puccinia striiformis f. sp. tritici microRNA-like RNA 1 (Pst -milR1), an important pathogenicity factor of Pst , impairs wheat resistance to Pst by suppressing the wheat pathogenesis-related 2 gene

(2017) Bing Wang et al.   NEW PHYTOLOGIST

Effective enhancement of resistance to Phytophthora infestans by overexpression of miR172a and b in Solanum lycopersicum

(2017) Yushi Luan et al.   PLANTA

The Arabidopsis miR396 mediates pathogen-associated molecular pattern-triggered immune responses against fungal pathogens

(2017) Mauricio Soto-Suárez et al.   Scientific Reports

The role of microRNA in abiotic stress response in plants

(2016) N. V. Koroban et al.   MOLECULAR BIOLOGY

The Diversification of PlantNBS-LRRDefense Genes Directs the Evolution of MicroRNAs That Target Them

(2016) Yu Zhang et al.   MOLECULAR BIOLOGY AND EVOLUTION

An Arabidopsis NAC transcription factor NAC4 promotes pathogen-induced cell death under negative regulation by microRNA164

(2016) Myoung-Hoon Lee et al.   NEW PHYTOLOGIST

miRNA-mediated auxin signalling repression during Vat -mediated aphid resistance in Cucumis melo

(2016) Sampurna Sattar et al.   PLANT CELL AND ENVIRONMENT

miRNA863-3p sequentially targets negative immune regulator ARLPKs and positive regulator SERRATE upon bacterial infection

(2016) Dongdong Niu et al.   Nature Communications

Enhanced Rice Blast Resistance by CRISPR/Cas9-Targeted Mutagenesis of the ERF Transcription Factor Gene OsERF922

(2016) Fujun Wang et al.   PLoS One

Genome-wide identification and functional analysis of lincRNAs acting as miRNA targets or decoys in maize

(2015) Chunyan Fan et al.   BMC GENOMICS

The role of plant small RNAs in NB-LRR regulation

(2015) June Hyun Park et al.   Briefings in Functional Genomics

Overexpression of potato miR482e enhanced plant sensitivity toVerticillium dahliaeinfection

(2015) Liu Yang et al.   Journal of Integrative Plant Biology

Evolution of NBS-LRR Gene Copies among Dicot Plants and its Regulation by Members of the miR482/2118 Superfamily of miRNAs

(2015) Víctor M. González et al.   Molecular Plant

Secondary siRNAs fromMedicago NB-LRRsmodulated via miRNA-target interactions and their abundances

(2015) Qili Fei et al.   PLANT JOURNAL

Regulation of Nicotine Biosynthesis by an Endogenous Target Mimicry of MicroRNA in Tobacco

(2015) Fangfang Li et al.   PLANT PHYSIOLOGY

Phytophthoraeffector targets a novel component of small RNA pathway in plants to promote infection

(2015) Yongli Qiao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors

(2015) Patricia Baldrich et al.   RNA Biology

Viral-inducible Argonaute18 confers broad-spectrum virus resistance in rice by sequestering a host microRNA

(2015) Jianguo Wu et al.   eLife

The I2 resistance gene homologues in Solanum have complex evolutionary patterns and are targeted by miRNAs

(2014) Chunhua Wei et al.   BMC GENOMICS

Effects of the sequence characteristics of miRNAs on multi-viral resistance mediated by single amiRNAs in transgenic tobacco

(2014) Yun-Zhi Song et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

miR482 Regulation of NBS-LRR Defense Genes during Fungal Pathogen Infection in Cotton

(2014) Qian-Hao Zhu et al.   PLoS One

The miR9863 Family Regulates Distinct Mla Alleles in Barley to Attenuate NLR Receptor-Triggered Disease Resistance and Cell-Death Signaling

(2014) Jie Liu et al.   PLoS Genetics

MicroRNAs Suppress NB Domain Genes in Tomato That Confer Resistance to Fusarium oxysporum

(2014) Shouqiang Ouyang et al.   PLoS Pathogens

The Arabidopsis miR472-RDR6 Silencing Pathway Modulates PAMP- and Effector-Triggered Immunity through the Post-transcriptional Control of Disease Resistance Genes

(2014) Martine Boccara et al.   PLoS Pathogens

Monodehydroascorbate reductase gene, regulated by the wheat PN-2013 miRNA, contributes to adult wheat plant resistance to stripe rust through ROS metabolism

(2013) Hao Feng et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Cloning and Characterization of miRNAs and Their Targets, Including a Novel miRNA-Targeted NBS–LRR Protein Class Gene in Apple (Golden Delicious)

(2013) Chao Ma et al.   Molecular Plant

The target gene of tae-miR164, a novel NAC transcription factor from the NAM subfamily, negatively regulates resistance of wheat to stripe rust

(2013) Hao Feng et al.   MOLECULAR PLANT PATHOLOGY

Oomycete pathogens encode RNA silencing suppressors

(2013) Yongli Qiao et al.   NATURE GENETICS

Identification of a novel microRNA (miRNA) from rice that targets an alternatively spliced transcript of theNramp6(Natural resistance-associated macrophage protein 6) gene involved in pathogen resistance

(2013) Sonia Campo et al.   NEW PHYTOLOGIST

MicroRNA-mediated gene regulation: potential applications for plant genetic engineering

(2013) Man Zhou et al.   PLANT MOLECULAR BIOLOGY

Widespread Long Noncoding RNAs as Endogenous Target Mimics for MicroRNAs in Plants

(2013) H.-J. Wu et al.   PLANT PHYSIOLOGY

Multiple Rice MicroRNAs Are Involved in Immunity against the Blast Fungus Magnaporthe oryzae

(2013) Y. Li et al.   PLANT PHYSIOLOGY

Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways

(2013) Arne Weiberg et al.   SCIENCE

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs

(2012) P. V. Shivaprasad et al.   PLANT CELL

Involvement of microRNA-Mediated Gene Expression Regulation in the Pathological Development of Stem Canker Disease in Populus trichocarpa

(2012) Jia-Ping Zhao et al.   PLoS One

MicroRNA regulation of plant innate immune receptors

(2012) F. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants

(2011) Basel Khraiwesh et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs

(2011) J. Zhai et al.   GENES & DEVELOPMENT

Arabidopsis Argonaute 2 Regulates Innate Immunity via miRNA393∗-Mediated Silencing of a Golgi-Localized SNARE Gene, MEMB12

(2011) Xiaoming Zhang et al.   MOLECULAR CELL

Multiple artificial microRNAs targeting conserved motifs of the replicase gene confer robust transgenic resistance to negative-sense single-stranded RNA plant virus

(2011) YI-JUNG KUNG et al.   MOLECULAR PLANT PATHOLOGY

The microRNA miR393 re-directs secondary metabolite biosynthesis away from camalexin and towards glucosinolates

(2011) Alexandre Robert-Seilaniantz et al.   PLANT JOURNAL

Stars and Symbiosis: MicroRNA- and MicroRNA*-Mediated Transcript Cleavage Involved in Arbuscular Mycorrhizal Symbiosis

(2011) E. A. Devers et al.   PLANT PHYSIOLOGY

Transcriptional Control of Gene Expression by MicroRNAs

(2010) Basel Khraiwesh et al.   CELL

DNA Methylation Mediated by a MicroRNA Pathway

(2010) Liang Wu et al.   MOLECULAR CELL

Identification of MicroRNAs Involved in Pathogen-Associated Molecular Pattern-Triggered Plant Innate Immunity

(2010) Y. Li et al.   PLANT PHYSIOLOGY

22-nucleotide RNAs trigger secondary siRNA biogenesis in plants

(2010) H.-M. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Biochemical Evidence for Translational Repression by Arabidopsis MicroRNAs

(2009) E. Lanet et al.   PLANT CELL

Innate Immunity in Plants: An Arms Race Between Pattern Recognition Receptors in Plants and Effectors in Microbial Pathogens

(2009) T. Boller et al.   SCIENCE

Sucrose induction of Arabidopsis miR398 represses two Cu/Zn superoxide dismutases

(2008) Diana V. Dugas et al.   PLANT MOLECULAR BIOLOGY