Changes in genome architecture and transcriptional dynamics progress independently of sensory experience during post-natal brain development
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Changes in genome architecture and transcriptional dynamics progress independently of sensory experience during post-natal brain development
Authors
Keywords
single-cell transcriptomics, epigenomics, chromatin folding, higher-order chromatin structure, epigenetics of plasticity, structural biology, molecular modeling, developmental biology, molecular psychiatry, neurogenesis
Journal
CELL
Volume -, Issue -, Pages -
Publisher
Elsevier BV
Online
2021-01-22
DOI
10.1016/j.cell.2020.12.032
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism
- (2020) F. Kyle Satterstrom et al. CELL
- Exome sequencing in schizophrenia-affected parent–offspring trios reveals risk conferred by protein-coding de novo mutations
- (2020) Daniel P. Howrigan et al. NATURE NEUROSCIENCE
- Single-nucleus RNA sequencing of mouse auditory cortex reveals critical period triggers and brakes
- (2020) Brian T. Kalish et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Robust Hi-C Maps of Enhancer-Promoter Interactions Reveal the Function of Non-coding Genome in Neural Development and Diseases
- (2020) Leina Lu et al. MOLECULAR CELL
- The cellular and molecular landscape of hypothalamic patterning and differentiation from embryonic to late postnatal development
- (2020) Dong Won Kim et al. Nature Communications
- In vivo Perturb-Seq reveals neuronal and glial abnormalities associated with autism risk genes
- (2020) Xin Jin et al. SCIENCE
- LHX2- and LDB1-mediated trans interactions regulate olfactory receptor choice
- (2019) Kevin Monahan et al. NATURE
- Single-cell RNA sequencing reveals midbrain dopamine neuron diversity emerging during mouse brain development
- (2019) Katarína Tiklová et al. Nature Communications
- Three-dimensional genome structures of single sensory neurons in mouse visual and olfactory systems
- (2019) Longzhi Tan et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility
- (2019) Caleb A. Lareau et al. NATURE BIOTECHNOLOGY
- Simultaneous profiling of 3D genome structure and DNA methylation in single human cells
- (2019) Dong-Sung Lee et al. NATURE METHODS
- Immediate and deferred epigenomic signatures of in vivo neuronal activation in mouse hippocampus
- (2019) Jordi Fernandez-Albert et al. NATURE NEUROSCIENCE
- Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- (2018) Alexander B. Rosenberg et al. SCIENCE
- Juicebox.js Provides a Cloud-Based Visualization System for Hi-C Data
- (2018) James T. Robinson et al. Cell Systems
- A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility
- (2018) Darren A. Cusanovich et al. CELL
- Molecular Architecture of the Mouse Nervous System
- (2018) Amit Zeisel et al. CELL
- A Single-Cell Transcriptional Atlas of the Developing Murine Cerebellum
- (2018) Robert A. Carter et al. CURRENT BIOLOGY
- Three-dimensional genome structures of single diploid human cells
- (2018) Longzhi Tan et al. SCIENCE
- Shared and distinct transcriptomic cell types across neocortical areas
- (2018) Bosiljka Tasic et al. NATURE
- Integrative functional genomic analysis of human brain development and neuropsychiatric risks
- (2018) Mingfeng Li et al. SCIENCE
- Neuron-specific signatures in the chromosomal connectome associated with schizophrenia risk
- (2018) Prashanth Rajarajan et al. SCIENCE
- The methyltransferase SETDB1 regulates a large neuron-specific topological chromatin domain
- (2017) Yan Jiang et al. NATURE GENETICS
- Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex
- (2017) Chongyuan Luo et al. SCIENCE
- Epigenetic Mechanisms of Longevity and Aging
- (2016) Payel Sen et al. CELL
- Chromosome conformation elucidates regulatory relationships in developing human brain
- (2016) Hyejung Won et al. NATURE
- Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
- (2016) Bosiljka Tasic et al. NATURE NEUROSCIENCE
- Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons
- (2016) Suguna Rani Krishnaswami et al. Nature Protocols
- Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain
- (2016) B. B. Lake et al. SCIENCE
- Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons
- (2016) Naomi Habib et al. SCIENCE
- Nuclear RNA-seq of single neurons reveals molecular signatures of activation
- (2016) Benjamin Lacar et al. Nature Communications
- Olfactory sensory neurons transiently express multiple olfactory receptors during development
- (2015) L. Tan et al. Molecular Systems Biology
- Quantitative and functional interrogation of parent-of-origin allelic expression biases in the brain
- (2015) Julio D Perez et al. eLife
- Mammalian SWI/SNF chromatin remodeling complexes and cancer: Mechanistic insights gained from human genomics
- (2015) C. Kadoch et al. Science Advances
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
- (2014) Suhas S.P. Rao et al. CELL
- An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex
- (2014) Y. Zhang et al. JOURNAL OF NEUROSCIENCE
- Cohesin-mediated interactions organize chromosomal domain architecture
- (2013) Sevil Sofueva et al. EMBO JOURNAL
- Global Epigenomic Reconfiguration During Mammalian Brain Development
- (2013) R. Lister et al. SCIENCE
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Nuclear Aggregation of Olfactory Receptor Genes Governs Their Monogenic Expression
- (2012) E. Josephine Clowney et al. CELL
- An Epigenetic Signature for Monoallelic Olfactory Receptor Expression
- (2011) Angeliki Magklara et al. CELL
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Nuclear Architecture of Rod Photoreceptor Cells Adapts to Vision in Mammalian Evolution
- (2009) Irina Solovei et al. CELL
- Imprinting regulates mammalian snoRNA-encoding chromatin decondensation and neuronal nucleolar size
- (2009) Karen N. Leung et al. HUMAN MOLECULAR GENETICS
- WGCNA: an R package for weighted correlation network analysis
- (2008) Peter Langfelder et al. BMC BIOINFORMATICS
- A Transcriptome Database for Astrocytes, Neurons, and Oligodendrocytes: A New Resource for Understanding Brain Development and Function
- (2008) J. D. Cahoy et al. JOURNAL OF NEUROSCIENCE
- Gene expression patterns in visual cortex during the critical period: Synaptic stabilization and reversal by visual deprivation
- (2008) A. W. Lyckman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation