DNA methylation in plants: mechanisms and tools for targeted manipulation

Site-specific manipulation of Arabidopsis loci using CRISPR-Cas9 SunTag systems

(2019) Ashot Papikian et al.   Nature Communications

Anaphase-promoting complex/cyclosome regulates RdDM activity by degrading DMS3 in Arabidopsis

(2019) Songxiao Zhong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Co-targeting RNA Polymerases IV and V Promotes Efficient De Novo DNA Methylation in Arabidopsis

(2019) Javier Gallego-Bartolomé et al.   CELL

Exogenous RNAs for Gene Regulation and Plant Resistance

(2019) Alexandra S. Dubrovina et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

RdDM-independent de novo and heterochromatin DNA methylation by plant CMT and DNMT3 orthologs

(2019) Rafael Yaari et al.   Nature Communications

Epimutations are associated with CHROMOMETHYLASE 3-induced de novo DNA methylation

(2019) Jered M Wendte et al.   eLife

Post-transcriptional gene silencing triggers dispensable DNA methylation in gene body in Arabidopsis

(2019) Christelle Taochy et al.   NUCLEIC ACIDS RESEARCH

Antagonistic and synergistic epigenetic modulation using orthologous CRISPR/dCas9-based modular system

(2019) Goran Josipović et al.   NUCLEIC ACIDS RESEARCH

Detailed insight into the dynamics of the initial phases of de novo RNA-directed DNA methylation in plant cells

(2019) Adéla Přibylová et al.   Epigenetics & Chromatin

DNA Methylation and Histone H1 Jointly Repress Transposable Elements and Aberrant Intragenic Transcripts

(2019) Jaemyung Choi et al.   MOLECULAR CELL

CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation

(2019) Somsakul Pop Wongpalee et al.   Nature Communications

Enhanced CRISPR-based DNA demethylation by Casilio-ME-mediated RNA-guided coupling of methylcytosine oxidation and DNA repair pathways

(2019) Aziz Taghbalout et al.   Nature Communications

Locus-specific control of the de novo DNA methylation pathway in Arabidopsis by the CLASSY family

(2018) Ming Zhou et al.   NATURE GENETICS

Dynamics and function of DNA methylation in plants

(2018) Huiming Zhang et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Targeted DNA demethylation of theArabidopsisgenome using the human TET1 catalytic domain

(2018) Javier Gallego-Bartolomé et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TET-mediated epimutagenesis of the Arabidopsis thaliana methylome

(2018) Lexiang Ji et al.   Nature Communications

A Group of SUVH Methyl-DNA Binding Proteins Regulate Expression of the DNA Demethylase ROS1 in Arabidopsis

(2018) Xinlong Xiao et al.   Journal of Integrative Plant Biology

A DNA methylation reader complex that enhances gene transcription

(2018) C. Jake Harris et al.   SCIENCE

TET-mediated active DNA demethylation: mechanism, function and beyond

(2017) Xiaoji Wu et al.   NATURE REVIEWS GENETICS

Taiwan Biobank: making cross-database convergence possible in the Big Data era

(2017) Jui-Chu Lin et al.   GigaScience

Targeted DNA methylation in pericentromeres with genome editing-based artificial DNA methyltransferase

(2017) Taiga Yamazaki et al.   PLoS One

RNA Silencing in Plants: Mechanisms, Technologies and Applications in Horticultural Crops

(2016) Qigao Guo et al.   CURRENT GENOMICS

Epigenetic transitions leading to heritable, RNA-mediated de novo silencing inArabidopsis thaliana

(2015) Donna M. Bond et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulatory link between DNA methylation and active demethylation inArabidopsis

(2015) Mingguang Lei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Methylation-Sensitive Expression of a DNA Demethylase Gene Serves As an Epigenetic Rheostat

(2015) Ben P. Williams et al.   PLoS Genetics

Molecular Mechanism of Action of Plant DRM De Novo DNA Methyltransferases

(2014) Xuehua Zhong et al.   CELL

A Protein-Tagging System for Signal Amplification in Gene Expression and Fluorescence Imaging

(2014) Marvin E. Tanenbaum et al.   CELL

SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation

(2014) Lianna M. Johnson et al.   NATURE

Gene silencing in plants: A diversity of pathways

(2013) Angel Emilio Martínez de Alba et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Plants regenerated from tissue culture contain stable epigenome changes in rice

(2013) Hume Stroud et al.   eLife

Targeted Methylation and Gene Silencing of VEGF-A in Human Cells by Using a Designed Dnmt3a–Dnmt3L Single-Chain Fusion Protein with Increased DNA Methylation Activity

(2012) Abu Nasar Siddique et al.   JOURNAL OF MOLECULAR BIOLOGY