A Role for Epigenetic Regulation in the Adaptation and Stress Responses of Non-model Plants

Methylation Sensitive Amplification Polymorphism Sequencing (MSAP-Seq)—A Method for High-Throughput Analysis of Differentially Methylated CCGG Sites in Plants with Large Genomes

(2017) Karolina Chwialkowska et al.   Frontiers in Plant Science

BsRADseq: screening DNA methylation in natural populations of non-model species

(2016) Emiliano Trucchi et al.   MOLECULAR ECOLOGY

epiGBS: reference-free reduced representation bisulfite sequencing

(2016) Thomas P van Gurp et al.   NATURE METHODS

Epigenetic Memory as a Basis for Intelligent Behavior in Clonal Plants

(2016) Vít Latzel et al.   Frontiers in Plant Science

Epigenetic variation and environmental change: Fig. 1.

(2015) Peter Meyer   JOURNAL OF EXPERIMENTAL BOTANY

Loss of Karma transposon methylation underlies the mantled somaclonal variant of oil palm

(2015) Meilina Ong-Abdullah et al.   NATURE

Small RNAs and regulation of transposons in plants

(2015) Hidetaka Ito   GENES & GENETIC SYSTEMS

Epigenetic memory in plants

(2014) M. Iwasaki et al.   EMBO JOURNAL

RNA-directed DNA methylation: an epigenetic pathway of increasing complexity

(2014) Marjori A. Matzke et al.   NATURE REVIEWS GENETICS

Epigenetic Memory for Stress Response and Adaptation in Plants

(2014) Tetsu Kinoshita et al.   PLANT AND CELL PHYSIOLOGY

Epigenetic Variability in the Genetically Uniform Forest Tree Species Pinus pinea L

(2014) Enrique Sáez-Laguna et al.   PLoS One

Epigenetic Regulation in Plant Responses to the Environment

(2014) D. C. Baulcombe et al.   Cold Spring Harbor Perspectives in Biology

Ecological Epigenetics: Beyond MS-AFLP

(2013) A. W. Schrey et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Scoring and analysis of methylation-sensitive amplification polymorphisms for epigenetic population studies

(2013) Benjamin Schulz et al.   Molecular Ecology Resources

Covering Your Bases: Inheritance of DNA Methylation in Plant Genomes

(2013) Chad E. Niederhuth et al.   Molecular Plant

Epigenetic correlates of plant phenotypic plasticity: DNA methylation differs between prickly and nonprickly leaves in heterophyllousIlex aquifolium(Aquifoliaceae) trees

(2012) Carlos M. Herrera et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants

(2012) Jiamu Du et al.   CELL

Reprogramming of DNA Methylation in Pollen Guides Epigenetic Inheritance via Small RNA

(2012) Joseph P. Calarco et al.   CELL

Vernalization - a cold-induced epigenetic switch

(2012) J. Song et al.   JOURNAL OF CELL SCIENCE

Widespread dynamic DNA methylation in response to biotic stress

(2012) R. H. Dowen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epigenetic contribution to stress adaptation in plants

(2011) Marie Mirouze et al.   CURRENT OPINION IN PLANT BIOLOGY

Stable Epigenetic Effects Impact Adaptation in Allopolyploid Orchids (Dactylorhiza: Orchidaceae)

(2010) O. Paun et al.   MOLECULAR BIOLOGY AND EVOLUTION

Transgenerational Inheritance and Resetting of Stress-Induced Loss of Epigenetic Gene Silencing in Arabidopsis

(2010) Christina Lang-Mladek et al.   Molecular Plant

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

Epigenetic differentiation and relationship to adaptive genetic divergence in discrete populations of the violet Viola cazorlensis

(2010) Carlos M. Herrera et al.   NEW PHYTOLOGIST

Genome-wide DNA methylation alterations of Alternanthera philoxeroides in natural and manipulated habitats: implications for epigenetic regulation of rapid responses to environmental fluctuation and phenotypic variation

(2010) LEXUAN GAO et al.   PLANT CELL AND ENVIRONMENT

Transgenerational Adaptation of Arabidopsis to Stress Requires DNA Methylation and the Function of Dicer-Like Proteins

(2010) Alex Boyko et al.   PLoS One

Epigenetic Variation in Mangrove Plants Occurring in Contrasting Natural Environment

(2010) Catarina Fonseca Lira-Medeiros et al.   PLoS One

Identification of a Cis-Acting Regulatory Polymorphism in a Eucalypt COBRA-Like Gene Affecting Cellulose Content

(2009) B. R. Thumma et al.   GENETICS

Stress-induced DNA methylation changes and their heritability in asexual dandelions

(2009) Koen J. F. Verhoeven et al.   NEW PHYTOLOGIST

Plant genomic DNA methylation in response to stresses: Potential applications and challenges in plant breeding

(2009) Hai Peng et al.   Progress in Natural Science-Materials International

Population-genomic approach reveals adaptive floral divergence in discrete populations of a hawk moth-pollinated violet

(2008) C. M. HERRERA et al.   MOLECULAR ECOLOGY

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

(2008) Shawn J. Cokus et al.   NATURE