Learning generative models for protein fold families

Computing Highly Correlated Positions Using Mutual Information and Graph Theory for G Protein-Coupled Receptors

(2009) Sarosh N. Fatakia et al.   PLoS One

Graphical models of protein-protein interaction specificity from correlated mutations and interaction data

(2009) John Thomas et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Graphical Models of Residue Coupling in Protein Families

(2008) J. Thomas et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Protein Design by Sampling an Undirected Graphical Model of Residue Constraints

(2008) J. Thomas et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Mapping of Two Networks of Residues That Exhibit Structural and Dynamical Changes upon Binding in a PDZ Domain Protein

(2008) Anne Dhulesia et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Identification of direct residue contacts in protein-protein interaction by message passing

(2008) M. Weigt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA